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Coleoptera genome and transcriptome sequences reveal numerous differences in neuropeptide signaling between species
BACKGROUND: Insect neuropeptides are interesting for the potential their receptors hold as plausible targets for a novel generation of pesticides. Neuropeptide genes have been identified in a number of different species belonging to a variety of insects. Results suggest significant neuropeptide vari...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6585902/ https://www.ncbi.nlm.nih.gov/pubmed/31245184 http://dx.doi.org/10.7717/peerj.7144 |
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author | Veenstra, Jan A. |
author_facet | Veenstra, Jan A. |
author_sort | Veenstra, Jan A. |
collection | PubMed |
description | BACKGROUND: Insect neuropeptides are interesting for the potential their receptors hold as plausible targets for a novel generation of pesticides. Neuropeptide genes have been identified in a number of different species belonging to a variety of insects. Results suggest significant neuropeptide variation between different orders, but much less is known of neuropeptidome variability within an insect order. I therefore compared the neuropeptidomes of a number of Coleoptera. METHODOLOGY: Publicly available genome sequences, transcriptomes and the original sequence data in the form of short sequence read archives were analyzed for the presence or absence of genes coding neuropeptides as well as some neuropeptide receptors in seventeen beetle species. RESULTS: Significant differences exist between the Coleoptera analyzed here, while many neuropeptides that were previously characterized from Tribolium castaneum appear very similar in all species, some are not and others are lacking in one or more species. On the other hand, leucokinin, which was presumed to be universally absent from Coleoptera, is still present in non-Polyphaga beetles. CONCLUSION: The variability in neuropeptidome composition between species from the same insect order may be as large as the one that exists between species from different orders. |
format | Online Article Text |
id | pubmed-6585902 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-65859022019-06-26 Coleoptera genome and transcriptome sequences reveal numerous differences in neuropeptide signaling between species Veenstra, Jan A. PeerJ Bioinformatics BACKGROUND: Insect neuropeptides are interesting for the potential their receptors hold as plausible targets for a novel generation of pesticides. Neuropeptide genes have been identified in a number of different species belonging to a variety of insects. Results suggest significant neuropeptide variation between different orders, but much less is known of neuropeptidome variability within an insect order. I therefore compared the neuropeptidomes of a number of Coleoptera. METHODOLOGY: Publicly available genome sequences, transcriptomes and the original sequence data in the form of short sequence read archives were analyzed for the presence or absence of genes coding neuropeptides as well as some neuropeptide receptors in seventeen beetle species. RESULTS: Significant differences exist between the Coleoptera analyzed here, while many neuropeptides that were previously characterized from Tribolium castaneum appear very similar in all species, some are not and others are lacking in one or more species. On the other hand, leucokinin, which was presumed to be universally absent from Coleoptera, is still present in non-Polyphaga beetles. CONCLUSION: The variability in neuropeptidome composition between species from the same insect order may be as large as the one that exists between species from different orders. PeerJ Inc. 2019-06-17 /pmc/articles/PMC6585902/ /pubmed/31245184 http://dx.doi.org/10.7717/peerj.7144 Text en © 2019 Veenstra http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Bioinformatics Veenstra, Jan A. Coleoptera genome and transcriptome sequences reveal numerous differences in neuropeptide signaling between species |
title | Coleoptera genome and transcriptome sequences reveal numerous differences in neuropeptide signaling between species |
title_full | Coleoptera genome and transcriptome sequences reveal numerous differences in neuropeptide signaling between species |
title_fullStr | Coleoptera genome and transcriptome sequences reveal numerous differences in neuropeptide signaling between species |
title_full_unstemmed | Coleoptera genome and transcriptome sequences reveal numerous differences in neuropeptide signaling between species |
title_short | Coleoptera genome and transcriptome sequences reveal numerous differences in neuropeptide signaling between species |
title_sort | coleoptera genome and transcriptome sequences reveal numerous differences in neuropeptide signaling between species |
topic | Bioinformatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6585902/ https://www.ncbi.nlm.nih.gov/pubmed/31245184 http://dx.doi.org/10.7717/peerj.7144 |
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