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On system-spanning demixing properties of cell polarization

A number of mathematical models have been suggested to describe cell polarization in eukaryotic cells. One class of models takes into account that certain proteins are conserved on the time scale of cell polarization and may switch between a fast and a slow diffusing state. We raise the question whe...

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Autores principales: Bergmann, Fabian, Zimmermann, Walter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6588261/
https://www.ncbi.nlm.nih.gov/pubmed/31226118
http://dx.doi.org/10.1371/journal.pone.0218328
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author Bergmann, Fabian
Zimmermann, Walter
author_facet Bergmann, Fabian
Zimmermann, Walter
author_sort Bergmann, Fabian
collection PubMed
description A number of mathematical models have been suggested to describe cell polarization in eukaryotic cells. One class of models takes into account that certain proteins are conserved on the time scale of cell polarization and may switch between a fast and a slow diffusing state. We raise the question whether models sharing this design feature can be condensed into one system-spanning model. We show exemplarily for the mass-conserved reaction-diffusion model of Otsuji et al. (Otsuji M et al. (2007) PLoS Comput Biol 3(6):e108) that cell polarization can be classified as active phase separation. This includes a fundamental connection between a number of non-equilibrium demixing phenomena such as cell polarization to phase separation. As shown recently, generic properties of active phase separation close to its onset are described by the Cahn-Hilliard model. By a systematic perturbation analysis we directly map the basic cell polarization model to the universal Cahn-Hilliard model. Comparing the numerical solutions of the polarization model and the Cahn-Hilliard equation also provides the parameter range where the basic cell polarization model behaves like other systems showing active phase separation. Polarization models of the active phase separation type cover essential properties of cell polarization, e.g. the adaptability of cell polarity to the length of growing cells. Our approach highlights how basic principles of pattern formation theory allow the identification of common basic properties in different models for cell polarization.
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spelling pubmed-65882612019-06-28 On system-spanning demixing properties of cell polarization Bergmann, Fabian Zimmermann, Walter PLoS One Research Article A number of mathematical models have been suggested to describe cell polarization in eukaryotic cells. One class of models takes into account that certain proteins are conserved on the time scale of cell polarization and may switch between a fast and a slow diffusing state. We raise the question whether models sharing this design feature can be condensed into one system-spanning model. We show exemplarily for the mass-conserved reaction-diffusion model of Otsuji et al. (Otsuji M et al. (2007) PLoS Comput Biol 3(6):e108) that cell polarization can be classified as active phase separation. This includes a fundamental connection between a number of non-equilibrium demixing phenomena such as cell polarization to phase separation. As shown recently, generic properties of active phase separation close to its onset are described by the Cahn-Hilliard model. By a systematic perturbation analysis we directly map the basic cell polarization model to the universal Cahn-Hilliard model. Comparing the numerical solutions of the polarization model and the Cahn-Hilliard equation also provides the parameter range where the basic cell polarization model behaves like other systems showing active phase separation. Polarization models of the active phase separation type cover essential properties of cell polarization, e.g. the adaptability of cell polarity to the length of growing cells. Our approach highlights how basic principles of pattern formation theory allow the identification of common basic properties in different models for cell polarization. Public Library of Science 2019-06-21 /pmc/articles/PMC6588261/ /pubmed/31226118 http://dx.doi.org/10.1371/journal.pone.0218328 Text en © 2019 Bergmann, Zimmermann http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Bergmann, Fabian
Zimmermann, Walter
On system-spanning demixing properties of cell polarization
title On system-spanning demixing properties of cell polarization
title_full On system-spanning demixing properties of cell polarization
title_fullStr On system-spanning demixing properties of cell polarization
title_full_unstemmed On system-spanning demixing properties of cell polarization
title_short On system-spanning demixing properties of cell polarization
title_sort on system-spanning demixing properties of cell polarization
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6588261/
https://www.ncbi.nlm.nih.gov/pubmed/31226118
http://dx.doi.org/10.1371/journal.pone.0218328
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