Cargando…
Peptoids advance multidisciplinary research and undergraduate education in parallel: Sequence effects on conformation and lipid interactions
Peptoids are versatile peptidomimetic molecules with wide‐ranging applications from drug discovery to materials science. An understanding of peptoid sequence features that contribute to both their three‐dimensional structures and their interactions with lipids will expand functions of peptoids in va...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley & Sons, Inc.
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6590334/ https://www.ncbi.nlm.nih.gov/pubmed/30633339 http://dx.doi.org/10.1002/bip.23256 |
_version_ | 1783429536307740672 |
---|---|
author | Jimenez, Christian J. Tan, Jiacheng Dowell, Kalli M. Gadbois, Gillian E. Read, Cameron A. Burgess, Nicole Cervantes, Jesus E. Chan, Shannon Jandaur, Anmol Karanik, Tara Lee, Jaenic J. Ley, Mikaela C. McGeehan, Molly McMonigal, Ann Palazzo, Kira L. Parker, Samantha A. Payman, Andre Soria, Maritza Verheyden, Lauren Vo, Vivian T. Yin, Jennifer Calkins, Anna L. Fuller, Amelia A. Stokes, Grace Y. |
author_facet | Jimenez, Christian J. Tan, Jiacheng Dowell, Kalli M. Gadbois, Gillian E. Read, Cameron A. Burgess, Nicole Cervantes, Jesus E. Chan, Shannon Jandaur, Anmol Karanik, Tara Lee, Jaenic J. Ley, Mikaela C. McGeehan, Molly McMonigal, Ann Palazzo, Kira L. Parker, Samantha A. Payman, Andre Soria, Maritza Verheyden, Lauren Vo, Vivian T. Yin, Jennifer Calkins, Anna L. Fuller, Amelia A. Stokes, Grace Y. |
author_sort | Jimenez, Christian J. |
collection | PubMed |
description | Peptoids are versatile peptidomimetic molecules with wide‐ranging applications from drug discovery to materials science. An understanding of peptoid sequence features that contribute to both their three‐dimensional structures and their interactions with lipids will expand functions of peptoids in varied fields. Furthermore, these topics capture the enthusiasm of undergraduate students who prepare and study diverse peptoids in laboratory coursework and/or in faculty led research. Here, we present the synthesis and study of 21 peptoids with varied functionality, including 19 tripeptoids and 2 longer oligomers. We observed differences in fluorescence spectral features for 10 of the tripeptoids that correlated with peptoid flexibility and relative positioning of chromophores. Interactions of representative peptoids with sonicated glycerophospholipid vesicles were also evaluated using fluorescence spectroscopy. We observed evidence of conformational changes effected by lipids for select peptoids. We also summarize our experiences engaging students in peptoid‐based projects to advance both research and undergraduate educational objectives in parallel. |
format | Online Article Text |
id | pubmed-6590334 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley & Sons, Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-65903342019-07-08 Peptoids advance multidisciplinary research and undergraduate education in parallel: Sequence effects on conformation and lipid interactions Jimenez, Christian J. Tan, Jiacheng Dowell, Kalli M. Gadbois, Gillian E. Read, Cameron A. Burgess, Nicole Cervantes, Jesus E. Chan, Shannon Jandaur, Anmol Karanik, Tara Lee, Jaenic J. Ley, Mikaela C. McGeehan, Molly McMonigal, Ann Palazzo, Kira L. Parker, Samantha A. Payman, Andre Soria, Maritza Verheyden, Lauren Vo, Vivian T. Yin, Jennifer Calkins, Anna L. Fuller, Amelia A. Stokes, Grace Y. Biopolymers Full Papers Peptoids are versatile peptidomimetic molecules with wide‐ranging applications from drug discovery to materials science. An understanding of peptoid sequence features that contribute to both their three‐dimensional structures and their interactions with lipids will expand functions of peptoids in varied fields. Furthermore, these topics capture the enthusiasm of undergraduate students who prepare and study diverse peptoids in laboratory coursework and/or in faculty led research. Here, we present the synthesis and study of 21 peptoids with varied functionality, including 19 tripeptoids and 2 longer oligomers. We observed differences in fluorescence spectral features for 10 of the tripeptoids that correlated with peptoid flexibility and relative positioning of chromophores. Interactions of representative peptoids with sonicated glycerophospholipid vesicles were also evaluated using fluorescence spectroscopy. We observed evidence of conformational changes effected by lipids for select peptoids. We also summarize our experiences engaging students in peptoid‐based projects to advance both research and undergraduate educational objectives in parallel. John Wiley & Sons, Inc. 2019-01-11 2019-04 /pmc/articles/PMC6590334/ /pubmed/30633339 http://dx.doi.org/10.1002/bip.23256 Text en © 2019 The Authors. Biopolymers published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Full Papers Jimenez, Christian J. Tan, Jiacheng Dowell, Kalli M. Gadbois, Gillian E. Read, Cameron A. Burgess, Nicole Cervantes, Jesus E. Chan, Shannon Jandaur, Anmol Karanik, Tara Lee, Jaenic J. Ley, Mikaela C. McGeehan, Molly McMonigal, Ann Palazzo, Kira L. Parker, Samantha A. Payman, Andre Soria, Maritza Verheyden, Lauren Vo, Vivian T. Yin, Jennifer Calkins, Anna L. Fuller, Amelia A. Stokes, Grace Y. Peptoids advance multidisciplinary research and undergraduate education in parallel: Sequence effects on conformation and lipid interactions |
title | Peptoids advance multidisciplinary research and undergraduate education in parallel: Sequence effects on conformation and lipid interactions |
title_full | Peptoids advance multidisciplinary research and undergraduate education in parallel: Sequence effects on conformation and lipid interactions |
title_fullStr | Peptoids advance multidisciplinary research and undergraduate education in parallel: Sequence effects on conformation and lipid interactions |
title_full_unstemmed | Peptoids advance multidisciplinary research and undergraduate education in parallel: Sequence effects on conformation and lipid interactions |
title_short | Peptoids advance multidisciplinary research and undergraduate education in parallel: Sequence effects on conformation and lipid interactions |
title_sort | peptoids advance multidisciplinary research and undergraduate education in parallel: sequence effects on conformation and lipid interactions |
topic | Full Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6590334/ https://www.ncbi.nlm.nih.gov/pubmed/30633339 http://dx.doi.org/10.1002/bip.23256 |
work_keys_str_mv | AT jimenezchristianj peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions AT tanjiacheng peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions AT dowellkallim peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions AT gadboisgilliane peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions AT readcamerona peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions AT burgessnicole peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions AT cervantesjesuse peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions AT chanshannon peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions AT jandauranmol peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions AT karaniktara peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions AT leejaenicj peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions AT leymikaelac peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions AT mcgeehanmolly peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions AT mcmonigalann peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions AT palazzokiral peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions AT parkersamanthaa peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions AT paymanandre peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions AT soriamaritza peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions AT verheydenlauren peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions AT voviviant peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions AT yinjennifer peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions AT calkinsannal peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions AT fullerameliaa peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions AT stokesgracey peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions |