Cargando…

Peptoids advance multidisciplinary research and undergraduate education in parallel: Sequence effects on conformation and lipid interactions

Peptoids are versatile peptidomimetic molecules with wide‐ranging applications from drug discovery to materials science. An understanding of peptoid sequence features that contribute to both their three‐dimensional structures and their interactions with lipids will expand functions of peptoids in va...

Descripción completa

Detalles Bibliográficos
Autores principales: Jimenez, Christian J., Tan, Jiacheng, Dowell, Kalli M., Gadbois, Gillian E., Read, Cameron A., Burgess, Nicole, Cervantes, Jesus E., Chan, Shannon, Jandaur, Anmol, Karanik, Tara, Lee, Jaenic J., Ley, Mikaela C., McGeehan, Molly, McMonigal, Ann, Palazzo, Kira L., Parker, Samantha A., Payman, Andre, Soria, Maritza, Verheyden, Lauren, Vo, Vivian T., Yin, Jennifer, Calkins, Anna L., Fuller, Amelia A., Stokes, Grace Y.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6590334/
https://www.ncbi.nlm.nih.gov/pubmed/30633339
http://dx.doi.org/10.1002/bip.23256
_version_ 1783429536307740672
author Jimenez, Christian J.
Tan, Jiacheng
Dowell, Kalli M.
Gadbois, Gillian E.
Read, Cameron A.
Burgess, Nicole
Cervantes, Jesus E.
Chan, Shannon
Jandaur, Anmol
Karanik, Tara
Lee, Jaenic J.
Ley, Mikaela C.
McGeehan, Molly
McMonigal, Ann
Palazzo, Kira L.
Parker, Samantha A.
Payman, Andre
Soria, Maritza
Verheyden, Lauren
Vo, Vivian T.
Yin, Jennifer
Calkins, Anna L.
Fuller, Amelia A.
Stokes, Grace Y.
author_facet Jimenez, Christian J.
Tan, Jiacheng
Dowell, Kalli M.
Gadbois, Gillian E.
Read, Cameron A.
Burgess, Nicole
Cervantes, Jesus E.
Chan, Shannon
Jandaur, Anmol
Karanik, Tara
Lee, Jaenic J.
Ley, Mikaela C.
McGeehan, Molly
McMonigal, Ann
Palazzo, Kira L.
Parker, Samantha A.
Payman, Andre
Soria, Maritza
Verheyden, Lauren
Vo, Vivian T.
Yin, Jennifer
Calkins, Anna L.
Fuller, Amelia A.
Stokes, Grace Y.
author_sort Jimenez, Christian J.
collection PubMed
description Peptoids are versatile peptidomimetic molecules with wide‐ranging applications from drug discovery to materials science. An understanding of peptoid sequence features that contribute to both their three‐dimensional structures and their interactions with lipids will expand functions of peptoids in varied fields. Furthermore, these topics capture the enthusiasm of undergraduate students who prepare and study diverse peptoids in laboratory coursework and/or in faculty led research. Here, we present the synthesis and study of 21 peptoids with varied functionality, including 19 tripeptoids and 2 longer oligomers. We observed differences in fluorescence spectral features for 10 of the tripeptoids that correlated with peptoid flexibility and relative positioning of chromophores. Interactions of representative peptoids with sonicated glycerophospholipid vesicles were also evaluated using fluorescence spectroscopy. We observed evidence of conformational changes effected by lipids for select peptoids. We also summarize our experiences engaging students in peptoid‐based projects to advance both research and undergraduate educational objectives in parallel.
format Online
Article
Text
id pubmed-6590334
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher John Wiley & Sons, Inc.
record_format MEDLINE/PubMed
spelling pubmed-65903342019-07-08 Peptoids advance multidisciplinary research and undergraduate education in parallel: Sequence effects on conformation and lipid interactions Jimenez, Christian J. Tan, Jiacheng Dowell, Kalli M. Gadbois, Gillian E. Read, Cameron A. Burgess, Nicole Cervantes, Jesus E. Chan, Shannon Jandaur, Anmol Karanik, Tara Lee, Jaenic J. Ley, Mikaela C. McGeehan, Molly McMonigal, Ann Palazzo, Kira L. Parker, Samantha A. Payman, Andre Soria, Maritza Verheyden, Lauren Vo, Vivian T. Yin, Jennifer Calkins, Anna L. Fuller, Amelia A. Stokes, Grace Y. Biopolymers Full Papers Peptoids are versatile peptidomimetic molecules with wide‐ranging applications from drug discovery to materials science. An understanding of peptoid sequence features that contribute to both their three‐dimensional structures and their interactions with lipids will expand functions of peptoids in varied fields. Furthermore, these topics capture the enthusiasm of undergraduate students who prepare and study diverse peptoids in laboratory coursework and/or in faculty led research. Here, we present the synthesis and study of 21 peptoids with varied functionality, including 19 tripeptoids and 2 longer oligomers. We observed differences in fluorescence spectral features for 10 of the tripeptoids that correlated with peptoid flexibility and relative positioning of chromophores. Interactions of representative peptoids with sonicated glycerophospholipid vesicles were also evaluated using fluorescence spectroscopy. We observed evidence of conformational changes effected by lipids for select peptoids. We also summarize our experiences engaging students in peptoid‐based projects to advance both research and undergraduate educational objectives in parallel. John Wiley & Sons, Inc. 2019-01-11 2019-04 /pmc/articles/PMC6590334/ /pubmed/30633339 http://dx.doi.org/10.1002/bip.23256 Text en © 2019 The Authors. Biopolymers published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Full Papers
Jimenez, Christian J.
Tan, Jiacheng
Dowell, Kalli M.
Gadbois, Gillian E.
Read, Cameron A.
Burgess, Nicole
Cervantes, Jesus E.
Chan, Shannon
Jandaur, Anmol
Karanik, Tara
Lee, Jaenic J.
Ley, Mikaela C.
McGeehan, Molly
McMonigal, Ann
Palazzo, Kira L.
Parker, Samantha A.
Payman, Andre
Soria, Maritza
Verheyden, Lauren
Vo, Vivian T.
Yin, Jennifer
Calkins, Anna L.
Fuller, Amelia A.
Stokes, Grace Y.
Peptoids advance multidisciplinary research and undergraduate education in parallel: Sequence effects on conformation and lipid interactions
title Peptoids advance multidisciplinary research and undergraduate education in parallel: Sequence effects on conformation and lipid interactions
title_full Peptoids advance multidisciplinary research and undergraduate education in parallel: Sequence effects on conformation and lipid interactions
title_fullStr Peptoids advance multidisciplinary research and undergraduate education in parallel: Sequence effects on conformation and lipid interactions
title_full_unstemmed Peptoids advance multidisciplinary research and undergraduate education in parallel: Sequence effects on conformation and lipid interactions
title_short Peptoids advance multidisciplinary research and undergraduate education in parallel: Sequence effects on conformation and lipid interactions
title_sort peptoids advance multidisciplinary research and undergraduate education in parallel: sequence effects on conformation and lipid interactions
topic Full Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6590334/
https://www.ncbi.nlm.nih.gov/pubmed/30633339
http://dx.doi.org/10.1002/bip.23256
work_keys_str_mv AT jimenezchristianj peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions
AT tanjiacheng peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions
AT dowellkallim peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions
AT gadboisgilliane peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions
AT readcamerona peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions
AT burgessnicole peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions
AT cervantesjesuse peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions
AT chanshannon peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions
AT jandauranmol peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions
AT karaniktara peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions
AT leejaenicj peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions
AT leymikaelac peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions
AT mcgeehanmolly peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions
AT mcmonigalann peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions
AT palazzokiral peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions
AT parkersamanthaa peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions
AT paymanandre peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions
AT soriamaritza peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions
AT verheydenlauren peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions
AT voviviant peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions
AT yinjennifer peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions
AT calkinsannal peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions
AT fullerameliaa peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions
AT stokesgracey peptoidsadvancemultidisciplinaryresearchandundergraduateeducationinparallelsequenceeffectsonconformationandlipidinteractions