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Comparison of Alterations in miRNA Expression in Matched Tissue and Blood Samples during Spinal Cord Glioma Progression
Abnormal expression of microRNAs (miRNAs) contributes to glioma initiation. However, the expression of miRNAs in tumour tissue or blood of spinal cord glioma (SCG) patients, particularly in high-grade spinal gliomas (Grade IV) known as glioblastoma (GBM), remains largely unknown. In this study we ai...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6591379/ https://www.ncbi.nlm.nih.gov/pubmed/31235820 http://dx.doi.org/10.1038/s41598-019-42364-x |
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author | An, Tian Fan, Tao Zhang, Xin Qing Liu, Yu-Fei Huang, Jiangpinghao Liang, Cong Lv, Bo-Han Wang, Yin-Qian Zhao, Xin-Gang Liu, Jia-Xian Fu, Yu- Huan Jiang, Guang-Jian |
author_facet | An, Tian Fan, Tao Zhang, Xin Qing Liu, Yu-Fei Huang, Jiangpinghao Liang, Cong Lv, Bo-Han Wang, Yin-Qian Zhao, Xin-Gang Liu, Jia-Xian Fu, Yu- Huan Jiang, Guang-Jian |
author_sort | An, Tian |
collection | PubMed |
description | Abnormal expression of microRNAs (miRNAs) contributes to glioma initiation. However, the expression of miRNAs in tumour tissue or blood of spinal cord glioma (SCG) patients, particularly in high-grade spinal gliomas (Grade IV) known as glioblastoma (GBM), remains largely unknown. In this study we aimed to determine differentially expressed miRNAs (DEmiRNAs) in the tissue and blood between spinal cord glioblastoma (SC-GBM) patients and low grade SCG (L-SCG) patients. Additionally, we predicted key miRNA targets and pathways that may be critical in glioma development using pathway and gene ontology analysis. A total of 74 miRNAs were determined to be differentially expressed (25 upregulated and 49 downregulated) in blood, while 207 miRNAs (20 up-regulated and 187 down-regulated) were identified in tissue samples. Gene ontology analysis revealed multicellular organism development and positive regulation of macromolecule metabolic process to be primarily involved. Pathway analysis revealed “Glioma”, “Signalling pathways regulating pluripotency of stem cells” to be the most relevant pathways. miRNA-mRNA analysis revealed that hsa-miRNA3196, hsa-miR-27a-3p, and hsa-miR-3664-3p and their target genes are involved in cancer progression. Our study provides a molecular basis for SCG pathological grading based on differential miRNA expression. |
format | Online Article Text |
id | pubmed-6591379 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-65913792019-07-02 Comparison of Alterations in miRNA Expression in Matched Tissue and Blood Samples during Spinal Cord Glioma Progression An, Tian Fan, Tao Zhang, Xin Qing Liu, Yu-Fei Huang, Jiangpinghao Liang, Cong Lv, Bo-Han Wang, Yin-Qian Zhao, Xin-Gang Liu, Jia-Xian Fu, Yu- Huan Jiang, Guang-Jian Sci Rep Article Abnormal expression of microRNAs (miRNAs) contributes to glioma initiation. However, the expression of miRNAs in tumour tissue or blood of spinal cord glioma (SCG) patients, particularly in high-grade spinal gliomas (Grade IV) known as glioblastoma (GBM), remains largely unknown. In this study we aimed to determine differentially expressed miRNAs (DEmiRNAs) in the tissue and blood between spinal cord glioblastoma (SC-GBM) patients and low grade SCG (L-SCG) patients. Additionally, we predicted key miRNA targets and pathways that may be critical in glioma development using pathway and gene ontology analysis. A total of 74 miRNAs were determined to be differentially expressed (25 upregulated and 49 downregulated) in blood, while 207 miRNAs (20 up-regulated and 187 down-regulated) were identified in tissue samples. Gene ontology analysis revealed multicellular organism development and positive regulation of macromolecule metabolic process to be primarily involved. Pathway analysis revealed “Glioma”, “Signalling pathways regulating pluripotency of stem cells” to be the most relevant pathways. miRNA-mRNA analysis revealed that hsa-miRNA3196, hsa-miR-27a-3p, and hsa-miR-3664-3p and their target genes are involved in cancer progression. Our study provides a molecular basis for SCG pathological grading based on differential miRNA expression. Nature Publishing Group UK 2019-06-24 /pmc/articles/PMC6591379/ /pubmed/31235820 http://dx.doi.org/10.1038/s41598-019-42364-x Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article An, Tian Fan, Tao Zhang, Xin Qing Liu, Yu-Fei Huang, Jiangpinghao Liang, Cong Lv, Bo-Han Wang, Yin-Qian Zhao, Xin-Gang Liu, Jia-Xian Fu, Yu- Huan Jiang, Guang-Jian Comparison of Alterations in miRNA Expression in Matched Tissue and Blood Samples during Spinal Cord Glioma Progression |
title | Comparison of Alterations in miRNA Expression in Matched Tissue and Blood Samples during Spinal Cord Glioma Progression |
title_full | Comparison of Alterations in miRNA Expression in Matched Tissue and Blood Samples during Spinal Cord Glioma Progression |
title_fullStr | Comparison of Alterations in miRNA Expression in Matched Tissue and Blood Samples during Spinal Cord Glioma Progression |
title_full_unstemmed | Comparison of Alterations in miRNA Expression in Matched Tissue and Blood Samples during Spinal Cord Glioma Progression |
title_short | Comparison of Alterations in miRNA Expression in Matched Tissue and Blood Samples during Spinal Cord Glioma Progression |
title_sort | comparison of alterations in mirna expression in matched tissue and blood samples during spinal cord glioma progression |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6591379/ https://www.ncbi.nlm.nih.gov/pubmed/31235820 http://dx.doi.org/10.1038/s41598-019-42364-x |
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