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Stacking sequence variations in vaterite resolved by precession electron diffraction tomography using a unified superspace model

As a metastable phase, vaterite is involved in the first step of crystallization of several carbonate-forming systems including the two stable polymorphs calcite and aragonite. Its complete structural determination would consequently shed important light to understand scaling formation and biominera...

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Autores principales: Steciuk, Gwladys, Palatinus, Lukáš, Rohlíček, Jan, Ouhenia, Salim, Chateigner, Daniel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6591425/
https://www.ncbi.nlm.nih.gov/pubmed/31235777
http://dx.doi.org/10.1038/s41598-019-45581-6
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author Steciuk, Gwladys
Palatinus, Lukáš
Rohlíček, Jan
Ouhenia, Salim
Chateigner, Daniel
author_facet Steciuk, Gwladys
Palatinus, Lukáš
Rohlíček, Jan
Ouhenia, Salim
Chateigner, Daniel
author_sort Steciuk, Gwladys
collection PubMed
description As a metastable phase, vaterite is involved in the first step of crystallization of several carbonate-forming systems including the two stable polymorphs calcite and aragonite. Its complete structural determination would consequently shed important light to understand scaling formation and biomineralization processes. While vaterite’s hexagonal substructure (a(0) ~ 4.1 Å and c(0) ~ 8.5 Å) and the organization of the carbonate groups within a single layer is known, conflicting interpretations regarding the stacking sequence remain and preclude the complete understanding of the structure. To resolve the ambiguities, we performed precession electron diffraction tomography (PEDT) to collect single crystal data from 100 K to the ambient temperature. The structure was solved ab initio and described over all the temperature range using a unified modulated structure model in the superspace group C12/c1(α0γ)00 with a = a(0) = 4.086(3) Å, b = [Formula: see text] a(0) = 7.089(9) Å, c = c(0) = 8.439(9) Å, α = β = γ = 90° and q = [Formula: see text] a* + γc*. At 100 K the model presents a pure 4-layer stacking sequence with γ = [Formula: see text] whereas at the ambient temperature, ordered stacking faults are introduced leading to γ < [Formula: see text] . The model was refined against PEDT data using the dynamical refinement procedure including modulation and twinning as well as against x-ray powder data by the Rietveld refinement.
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spelling pubmed-65914252019-07-02 Stacking sequence variations in vaterite resolved by precession electron diffraction tomography using a unified superspace model Steciuk, Gwladys Palatinus, Lukáš Rohlíček, Jan Ouhenia, Salim Chateigner, Daniel Sci Rep Article As a metastable phase, vaterite is involved in the first step of crystallization of several carbonate-forming systems including the two stable polymorphs calcite and aragonite. Its complete structural determination would consequently shed important light to understand scaling formation and biomineralization processes. While vaterite’s hexagonal substructure (a(0) ~ 4.1 Å and c(0) ~ 8.5 Å) and the organization of the carbonate groups within a single layer is known, conflicting interpretations regarding the stacking sequence remain and preclude the complete understanding of the structure. To resolve the ambiguities, we performed precession electron diffraction tomography (PEDT) to collect single crystal data from 100 K to the ambient temperature. The structure was solved ab initio and described over all the temperature range using a unified modulated structure model in the superspace group C12/c1(α0γ)00 with a = a(0) = 4.086(3) Å, b = [Formula: see text] a(0) = 7.089(9) Å, c = c(0) = 8.439(9) Å, α = β = γ = 90° and q = [Formula: see text] a* + γc*. At 100 K the model presents a pure 4-layer stacking sequence with γ = [Formula: see text] whereas at the ambient temperature, ordered stacking faults are introduced leading to γ < [Formula: see text] . The model was refined against PEDT data using the dynamical refinement procedure including modulation and twinning as well as against x-ray powder data by the Rietveld refinement. Nature Publishing Group UK 2019-06-24 /pmc/articles/PMC6591425/ /pubmed/31235777 http://dx.doi.org/10.1038/s41598-019-45581-6 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Steciuk, Gwladys
Palatinus, Lukáš
Rohlíček, Jan
Ouhenia, Salim
Chateigner, Daniel
Stacking sequence variations in vaterite resolved by precession electron diffraction tomography using a unified superspace model
title Stacking sequence variations in vaterite resolved by precession electron diffraction tomography using a unified superspace model
title_full Stacking sequence variations in vaterite resolved by precession electron diffraction tomography using a unified superspace model
title_fullStr Stacking sequence variations in vaterite resolved by precession electron diffraction tomography using a unified superspace model
title_full_unstemmed Stacking sequence variations in vaterite resolved by precession electron diffraction tomography using a unified superspace model
title_short Stacking sequence variations in vaterite resolved by precession electron diffraction tomography using a unified superspace model
title_sort stacking sequence variations in vaterite resolved by precession electron diffraction tomography using a unified superspace model
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6591425/
https://www.ncbi.nlm.nih.gov/pubmed/31235777
http://dx.doi.org/10.1038/s41598-019-45581-6
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