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SOCS2 is part of a highly prognostic 4-gene signature in AML and promotes disease aggressiveness

Acute myeloid leukemia (AML) is a heterogeneous disease with respect to its genetic and molecular basis and to patients´ outcome. Clinical, cytogenetic, and mutational data are used to classify patients into risk groups with different survival, however, within-group heterogeneity is still an issue....

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Autores principales: Nguyen, Chi Huu, Glüxam, Tobias, Schlerka, Angela, Bauer, Katharina, Grandits, Alexander M., Hackl, Hubert, Dovey, Oliver, Zöchbauer-Müller, Sabine, Cooper, Jonathan L., Vassiliou, George S., Stoiber, Dagmar, Wieser, Rotraud, Heller, Gerwin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6591510/
https://www.ncbi.nlm.nih.gov/pubmed/31235852
http://dx.doi.org/10.1038/s41598-019-45579-0
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author Nguyen, Chi Huu
Glüxam, Tobias
Schlerka, Angela
Bauer, Katharina
Grandits, Alexander M.
Hackl, Hubert
Dovey, Oliver
Zöchbauer-Müller, Sabine
Cooper, Jonathan L.
Vassiliou, George S.
Stoiber, Dagmar
Wieser, Rotraud
Heller, Gerwin
author_facet Nguyen, Chi Huu
Glüxam, Tobias
Schlerka, Angela
Bauer, Katharina
Grandits, Alexander M.
Hackl, Hubert
Dovey, Oliver
Zöchbauer-Müller, Sabine
Cooper, Jonathan L.
Vassiliou, George S.
Stoiber, Dagmar
Wieser, Rotraud
Heller, Gerwin
author_sort Nguyen, Chi Huu
collection PubMed
description Acute myeloid leukemia (AML) is a heterogeneous disease with respect to its genetic and molecular basis and to patients´ outcome. Clinical, cytogenetic, and mutational data are used to classify patients into risk groups with different survival, however, within-group heterogeneity is still an issue. Here, we used a robust likelihood-based survival modeling approach and publicly available gene expression data to identify a minimal number of genes whose combined expression values were prognostic of overall survival. The resulting gene expression signature (4-GES) consisted of 4 genes (SOCS2, IL2RA, NPDC1, PHGDH), predicted patient survival as an independent prognostic parameter in several cohorts of AML patients (total, 1272 patients), and further refined prognostication based on the European Leukemia Net classification. An oncogenic role of the top scoring gene in this signature, SOCS2, was investigated using MLL-AF9 and Flt3-ITD/NPM1c driven mouse models of AML. SOCS2 promoted leukemogenesis as well as the abundance, quiescence, and activity of AML stem cells. Overall, the 4-GES represents a highly discriminating prognostic parameter in AML, whose clinical applicability is greatly enhanced by its small number of genes. The newly established role of SOCS2 in leukemia aggressiveness and stemness raises the possibility that the signature might even be exploitable therapeutically.
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spelling pubmed-65915102019-07-03 SOCS2 is part of a highly prognostic 4-gene signature in AML and promotes disease aggressiveness Nguyen, Chi Huu Glüxam, Tobias Schlerka, Angela Bauer, Katharina Grandits, Alexander M. Hackl, Hubert Dovey, Oliver Zöchbauer-Müller, Sabine Cooper, Jonathan L. Vassiliou, George S. Stoiber, Dagmar Wieser, Rotraud Heller, Gerwin Sci Rep Article Acute myeloid leukemia (AML) is a heterogeneous disease with respect to its genetic and molecular basis and to patients´ outcome. Clinical, cytogenetic, and mutational data are used to classify patients into risk groups with different survival, however, within-group heterogeneity is still an issue. Here, we used a robust likelihood-based survival modeling approach and publicly available gene expression data to identify a minimal number of genes whose combined expression values were prognostic of overall survival. The resulting gene expression signature (4-GES) consisted of 4 genes (SOCS2, IL2RA, NPDC1, PHGDH), predicted patient survival as an independent prognostic parameter in several cohorts of AML patients (total, 1272 patients), and further refined prognostication based on the European Leukemia Net classification. An oncogenic role of the top scoring gene in this signature, SOCS2, was investigated using MLL-AF9 and Flt3-ITD/NPM1c driven mouse models of AML. SOCS2 promoted leukemogenesis as well as the abundance, quiescence, and activity of AML stem cells. Overall, the 4-GES represents a highly discriminating prognostic parameter in AML, whose clinical applicability is greatly enhanced by its small number of genes. The newly established role of SOCS2 in leukemia aggressiveness and stemness raises the possibility that the signature might even be exploitable therapeutically. Nature Publishing Group UK 2019-06-24 /pmc/articles/PMC6591510/ /pubmed/31235852 http://dx.doi.org/10.1038/s41598-019-45579-0 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Nguyen, Chi Huu
Glüxam, Tobias
Schlerka, Angela
Bauer, Katharina
Grandits, Alexander M.
Hackl, Hubert
Dovey, Oliver
Zöchbauer-Müller, Sabine
Cooper, Jonathan L.
Vassiliou, George S.
Stoiber, Dagmar
Wieser, Rotraud
Heller, Gerwin
SOCS2 is part of a highly prognostic 4-gene signature in AML and promotes disease aggressiveness
title SOCS2 is part of a highly prognostic 4-gene signature in AML and promotes disease aggressiveness
title_full SOCS2 is part of a highly prognostic 4-gene signature in AML and promotes disease aggressiveness
title_fullStr SOCS2 is part of a highly prognostic 4-gene signature in AML and promotes disease aggressiveness
title_full_unstemmed SOCS2 is part of a highly prognostic 4-gene signature in AML and promotes disease aggressiveness
title_short SOCS2 is part of a highly prognostic 4-gene signature in AML and promotes disease aggressiveness
title_sort socs2 is part of a highly prognostic 4-gene signature in aml and promotes disease aggressiveness
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6591510/
https://www.ncbi.nlm.nih.gov/pubmed/31235852
http://dx.doi.org/10.1038/s41598-019-45579-0
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