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SOCS2 is part of a highly prognostic 4-gene signature in AML and promotes disease aggressiveness
Acute myeloid leukemia (AML) is a heterogeneous disease with respect to its genetic and molecular basis and to patients´ outcome. Clinical, cytogenetic, and mutational data are used to classify patients into risk groups with different survival, however, within-group heterogeneity is still an issue....
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6591510/ https://www.ncbi.nlm.nih.gov/pubmed/31235852 http://dx.doi.org/10.1038/s41598-019-45579-0 |
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author | Nguyen, Chi Huu Glüxam, Tobias Schlerka, Angela Bauer, Katharina Grandits, Alexander M. Hackl, Hubert Dovey, Oliver Zöchbauer-Müller, Sabine Cooper, Jonathan L. Vassiliou, George S. Stoiber, Dagmar Wieser, Rotraud Heller, Gerwin |
author_facet | Nguyen, Chi Huu Glüxam, Tobias Schlerka, Angela Bauer, Katharina Grandits, Alexander M. Hackl, Hubert Dovey, Oliver Zöchbauer-Müller, Sabine Cooper, Jonathan L. Vassiliou, George S. Stoiber, Dagmar Wieser, Rotraud Heller, Gerwin |
author_sort | Nguyen, Chi Huu |
collection | PubMed |
description | Acute myeloid leukemia (AML) is a heterogeneous disease with respect to its genetic and molecular basis and to patients´ outcome. Clinical, cytogenetic, and mutational data are used to classify patients into risk groups with different survival, however, within-group heterogeneity is still an issue. Here, we used a robust likelihood-based survival modeling approach and publicly available gene expression data to identify a minimal number of genes whose combined expression values were prognostic of overall survival. The resulting gene expression signature (4-GES) consisted of 4 genes (SOCS2, IL2RA, NPDC1, PHGDH), predicted patient survival as an independent prognostic parameter in several cohorts of AML patients (total, 1272 patients), and further refined prognostication based on the European Leukemia Net classification. An oncogenic role of the top scoring gene in this signature, SOCS2, was investigated using MLL-AF9 and Flt3-ITD/NPM1c driven mouse models of AML. SOCS2 promoted leukemogenesis as well as the abundance, quiescence, and activity of AML stem cells. Overall, the 4-GES represents a highly discriminating prognostic parameter in AML, whose clinical applicability is greatly enhanced by its small number of genes. The newly established role of SOCS2 in leukemia aggressiveness and stemness raises the possibility that the signature might even be exploitable therapeutically. |
format | Online Article Text |
id | pubmed-6591510 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-65915102019-07-03 SOCS2 is part of a highly prognostic 4-gene signature in AML and promotes disease aggressiveness Nguyen, Chi Huu Glüxam, Tobias Schlerka, Angela Bauer, Katharina Grandits, Alexander M. Hackl, Hubert Dovey, Oliver Zöchbauer-Müller, Sabine Cooper, Jonathan L. Vassiliou, George S. Stoiber, Dagmar Wieser, Rotraud Heller, Gerwin Sci Rep Article Acute myeloid leukemia (AML) is a heterogeneous disease with respect to its genetic and molecular basis and to patients´ outcome. Clinical, cytogenetic, and mutational data are used to classify patients into risk groups with different survival, however, within-group heterogeneity is still an issue. Here, we used a robust likelihood-based survival modeling approach and publicly available gene expression data to identify a minimal number of genes whose combined expression values were prognostic of overall survival. The resulting gene expression signature (4-GES) consisted of 4 genes (SOCS2, IL2RA, NPDC1, PHGDH), predicted patient survival as an independent prognostic parameter in several cohorts of AML patients (total, 1272 patients), and further refined prognostication based on the European Leukemia Net classification. An oncogenic role of the top scoring gene in this signature, SOCS2, was investigated using MLL-AF9 and Flt3-ITD/NPM1c driven mouse models of AML. SOCS2 promoted leukemogenesis as well as the abundance, quiescence, and activity of AML stem cells. Overall, the 4-GES represents a highly discriminating prognostic parameter in AML, whose clinical applicability is greatly enhanced by its small number of genes. The newly established role of SOCS2 in leukemia aggressiveness and stemness raises the possibility that the signature might even be exploitable therapeutically. Nature Publishing Group UK 2019-06-24 /pmc/articles/PMC6591510/ /pubmed/31235852 http://dx.doi.org/10.1038/s41598-019-45579-0 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Nguyen, Chi Huu Glüxam, Tobias Schlerka, Angela Bauer, Katharina Grandits, Alexander M. Hackl, Hubert Dovey, Oliver Zöchbauer-Müller, Sabine Cooper, Jonathan L. Vassiliou, George S. Stoiber, Dagmar Wieser, Rotraud Heller, Gerwin SOCS2 is part of a highly prognostic 4-gene signature in AML and promotes disease aggressiveness |
title | SOCS2 is part of a highly prognostic 4-gene signature in AML and promotes disease aggressiveness |
title_full | SOCS2 is part of a highly prognostic 4-gene signature in AML and promotes disease aggressiveness |
title_fullStr | SOCS2 is part of a highly prognostic 4-gene signature in AML and promotes disease aggressiveness |
title_full_unstemmed | SOCS2 is part of a highly prognostic 4-gene signature in AML and promotes disease aggressiveness |
title_short | SOCS2 is part of a highly prognostic 4-gene signature in AML and promotes disease aggressiveness |
title_sort | socs2 is part of a highly prognostic 4-gene signature in aml and promotes disease aggressiveness |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6591510/ https://www.ncbi.nlm.nih.gov/pubmed/31235852 http://dx.doi.org/10.1038/s41598-019-45579-0 |
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