Cargando…

Using genotyping‐by‐sequencing to predict gender in animals

Gender assignment errors are common in some animal species and lead to inaccuracies in downstream analyses. Procedures for detecting gender misassignment are available for array‐based SNP data but are still being developed for genotyping‐by‐sequencing (GBS) data. In this study, we describe a method...

Descripción completa

Detalles Bibliográficos
Autores principales:	Bilton, T. P., Chappell, A. J., Clarke, S. M., Brauning, R., Dodds, K. G., McEwan, J. C., Rowe, S. J.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	John Wiley and Sons Inc. 2019
Materias:	Short Communications
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6593676/ https://www.ncbi.nlm.nih.gov/pubmed/30957265 http://dx.doi.org/10.1111/age.12782

Ejemplares similares

Exclusion and Genomic Relatedness Methods for Assignment of Parentage Using Genotyping-by-Sequencing Data
por: Dodds, Ken G., et al.
Publicado: (2019)

Application of Low Coverage Genotyping by Sequencing in Selectively Bred Arctic Charr (Salvelinus alpinus)
por: Palaiokostas, Christos, et al.
Publicado: (2020)

Linkage Disequilibrium Estimation in Low Coverage High-Throughput Sequencing Data
por: Bilton, Timothy P., et al.
Publicado: (2018)

Construction of relatedness matrices using genotyping-by-sequencing data
por: Dodds, Ken G., et al.
Publicado: (2015)

Estimation of linkage disequilibrium and effective population size in New Zealand sheep using three different methods to create genetic maps
por: Prieur, Vincent, et al.
Publicado: (2017)

Low-cost sample preservation methods for high-throughput processing of rumen microbiomes
por: Budel, Juliana C. C., et al.
Publicado: (2022)

Hitchhiking Mapping of Candidate Regions Associated with Fat Deposition in Iranian Thin and Fat Tail Sheep Breeds Suggests New Insights into Molecular Aspects of Fat Tail Selection
por: Moradi, Mohammad Hossein, et al.
Publicado: (2022)

Genomic prediction from observed and imputed high-density ovine genotypes
por: Moghaddar, Nasir, et al.
Publicado: (2017)

Target capture sequencing for the first Nigerian genotype I ASFV genome
por: Adeola, Adeniyi C., et al.
Publicado: (2023)

Phenotypic and Genotypic Characterization of Antimicrobial Resistance in Streptococci Isolated from Human and Animal Clinical Specimens
por: Glajzner, Paulina, et al.
Publicado: (2023)

Clustering of cognitive phenotypes identifies susceptible and resilient offspring in a rat model of maternal immune activation and early-life stress
por: Lorusso, Jarred M., et al.
Publicado: (2022)

The role of preclinical animal models in breast cancer drug development
por: Clarke, Robert
Publicado: (2009)

Ovine rumen papillae biopsy via oral endoscopy; a rapid and repeatable method for serial sampling
por: McRae, KM, et al.
Publicado: (2016)

Genomic prediction and genome-wide association study for dagginess and host internal parasite resistance in New Zealand sheep
por: Pickering, Natalie K., et al.
Publicado: (2015)

Quantifying variation in the potential for antibody-mediated apparent competition among nine genotypes of the rodent malaria parasite Plasmodium chabaudi()
por: Fairlie-Clarke, Karen J., et al.
Publicado: (2013)

Comparison of the choice of animals for re-sequencing in two maternal pig lines
por: Dauben, Christina M., et al.
Publicado: (2022)

Large-scale analysis of sheep rumen metagenome profiles captured by reduced representation sequencing reveals individual profiles are influenced by the environment and genetics of the host
por: Hess, Melanie K., et al.
Publicado: (2023)

Genomic breed prediction in New Zealand sheep
por: Dodds, Ken G, et al.
Publicado: (2014)

Copy number variants in the sheep genome detected using multiple approaches
por: Jenkins, Gemma M., et al.
Publicado: (2016)

The Role of Plastic Surgeons in Female Genital Mutilation Reconstructive Surgery
por: Chappell, Ava G., et al.
Publicado: (2021)

The relationship between longevity and diet is genotype dependent and sensitive to desiccation in Drosophila melanogaster
por: McCracken, Andrew W., et al.
Publicado: (2020)

Genomic Tools for the Identification of Loci Associated with Facial Eczema in New Zealand Sheep
por: McRae, Kathryn M., et al.
Publicado: (2021)

Gender of offspring and long-term maternal breast cancer risk
por: Wohlfahrt, J, et al.
Publicado: (2000)

Contextualising gender intersectionality with the COVID-19 pandemic
por: Baig, K.
Publicado: (2021)

An entropy-reducing data representation approach for bioinformatic data
por: McCulloch, Alan F, et al.
Publicado: (2018)

Primary tumour PSMA intensity is an independent prognostic biomarker for biochemical recurrence-free survival following radical prostatectomy
por: Roberts, Matthew J., et al.
Publicado: (2022)

Gender Equality and the Global Gender Gap in Life Expectancy: An Exploratory Analysis of 152 Countries
por: Mateos, José Tomás, et al.
Publicado: (2020)

Determination of Steroidal Saponins and Fixed Oil Content in Fenugreek (Trigonella foenum-graecum) Genotypes
por: Arivalagan, M., et al.
Publicado: (2013)

Delayed DNA double-strand break repair following platin-based chemotherapy predicts treatment response in head and neck squamous cell carcinoma
por: Bhide, S A, et al.
Publicado: (2016)

Beyond the genome: a perspective on the use of DNA methylation profiles as a tool for the livestock industry
por: Clarke, Shannon, et al.
Publicado: (2021)

Complete Genome Sequence of a Novel RNA Virus Identified from a Deep-Sea Animal, Osedax japonicus
por: Urayama, Syun-ichi, et al.
Publicado: (2018)

Successful Bacterial Engraftment Identified by Next-Generation Sequencing Predicts Success of Fecal Microbiota Transplant for Clostridioides difficile
por: Hazan, Sabine, et al.
Publicado: (2021)

Gender Distribution in Deep Brain Stimulation for Parkinson’s Disease: The Effect of Awake versus Asleep Surgery
por: Vinke, R. Saman, et al.
Publicado: (2022)

Use of whole-genome sequencing to detect transmission of group A Streptococcus in Houston, TX
por: Alamarat, Zain I., et al.
Publicado: (2022)

Restricted dog leucocyte antigen (DLA) class II haplotypes and genotypes in Beagles
por: Soutter, Francesca, et al.
Publicado: (2015)

Key associations for hepatitis C virus genotypes in the Middle East and North Africa
por: Mahmud, Sarwat, et al.
Publicado: (2019)

Signatures of selection in sheep bred for resistance or susceptibility to gastrointestinal nematodes
por: McRae, Kathryn M, et al.
Publicado: (2014)

Are there gender differences in levels of heavy, binge and problem drinking? Evidence from three generations in the west of Scotland
por: Emslie, C., et al.
Publicado: (2009)

The gender authorship gap in gynecologic oncology research()
por: Penn, Courtney A., et al.
Publicado: (2019)

COVID-19: A gender-biased pandemic
por: Singh, Ridhima, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_3augap297gbrc98b9gfmvpoqaf