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Pharmacogenomics of statin-related myopathy: Meta-analysis of rare variants from whole-exome sequencing
AIMS: Statin-related myopathy (SRM), which includes rhabdomyolysis, is an uncommon but important adverse drug reaction because the number of people prescribed statins world-wide is large. Previous association studies of common genetic variants have had limited success in identifying a genetic basis...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6594672/ https://www.ncbi.nlm.nih.gov/pubmed/31242253 http://dx.doi.org/10.1371/journal.pone.0218115 |
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author | Floyd, James S. Bloch, Katarzyna M. Brody, Jennifer A. Maroteau, Cyrielle Siddiqui, Moneeza K. Gregory, Richard Carr, Daniel F. Molokhia, Mariam Liu, Xiaoming Bis, Joshua C. Ahmed, Ammar Liu, Xuan Hallberg, Pär Yue, Qun-Ying Magnusson, Patrik K. E. Brisson, Diane Wiggins, Kerri L. Morrison, Alanna C. Khoury, Etienne McKeigue, Paul Stricker, Bruno H. Lapeyre-Mestre, Maryse Heckbert, Susan R. Gallagher, Arlene M. Chinoy, Hector Gibbs, Richard A. Bondon-Guitton, Emmanuelle Tracy, Russell Boerwinkle, Eric Gaudet, Daniel Conforti, Anita van Staa, Tjeerd Sitlani, Colleen M. Rice, Kenneth M. Maitland-van der Zee, Anke-Hilse Wadelius, Mia Morris, Andrew P. Pirmohamed, Munir Palmer, Colin A. N. Psaty, Bruce M. Alfirevic, Ana |
author_facet | Floyd, James S. Bloch, Katarzyna M. Brody, Jennifer A. Maroteau, Cyrielle Siddiqui, Moneeza K. Gregory, Richard Carr, Daniel F. Molokhia, Mariam Liu, Xiaoming Bis, Joshua C. Ahmed, Ammar Liu, Xuan Hallberg, Pär Yue, Qun-Ying Magnusson, Patrik K. E. Brisson, Diane Wiggins, Kerri L. Morrison, Alanna C. Khoury, Etienne McKeigue, Paul Stricker, Bruno H. Lapeyre-Mestre, Maryse Heckbert, Susan R. Gallagher, Arlene M. Chinoy, Hector Gibbs, Richard A. Bondon-Guitton, Emmanuelle Tracy, Russell Boerwinkle, Eric Gaudet, Daniel Conforti, Anita van Staa, Tjeerd Sitlani, Colleen M. Rice, Kenneth M. Maitland-van der Zee, Anke-Hilse Wadelius, Mia Morris, Andrew P. Pirmohamed, Munir Palmer, Colin A. N. Psaty, Bruce M. Alfirevic, Ana |
author_sort | Floyd, James S. |
collection | PubMed |
description | AIMS: Statin-related myopathy (SRM), which includes rhabdomyolysis, is an uncommon but important adverse drug reaction because the number of people prescribed statins world-wide is large. Previous association studies of common genetic variants have had limited success in identifying a genetic basis for this adverse drug reaction. We conducted a multi-site whole-exome sequencing study to investigate whether rare coding variants confer an increased risk of SRM. METHODS AND RESULTS: SRM 3–5 cases (N = 505) and statin treatment-tolerant controls (N = 2047) were recruited from multiple sites in North America and Europe. SRM 3–5 was defined as symptoms consistent with muscle injury and an elevated creatine phosphokinase level >4 times upper limit of normal without another likely cause of muscle injury. Whole-exome sequencing and variant calling was coordinated from two analysis centres, and results of single-variant and gene-based burden tests were meta-analysed. No genome-wide significant associations were identified. Given the large number of cases, we had 80% power to identify a variant with minor allele frequency of 0.01 that increases the risk of SRM 6-fold at genome-wide significance. CONCLUSIONS: In this large whole-exome sequencing study of severe statin-related muscle injury conducted to date, we did not find evidence that rare coding variants are responsible for this adverse drug reaction. Larger sample sizes would be required to identify rare variants with small effects, but it is unclear whether such findings would be clinically actionable. |
format | Online Article Text |
id | pubmed-6594672 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-65946722019-07-05 Pharmacogenomics of statin-related myopathy: Meta-analysis of rare variants from whole-exome sequencing Floyd, James S. Bloch, Katarzyna M. Brody, Jennifer A. Maroteau, Cyrielle Siddiqui, Moneeza K. Gregory, Richard Carr, Daniel F. Molokhia, Mariam Liu, Xiaoming Bis, Joshua C. Ahmed, Ammar Liu, Xuan Hallberg, Pär Yue, Qun-Ying Magnusson, Patrik K. E. Brisson, Diane Wiggins, Kerri L. Morrison, Alanna C. Khoury, Etienne McKeigue, Paul Stricker, Bruno H. Lapeyre-Mestre, Maryse Heckbert, Susan R. Gallagher, Arlene M. Chinoy, Hector Gibbs, Richard A. Bondon-Guitton, Emmanuelle Tracy, Russell Boerwinkle, Eric Gaudet, Daniel Conforti, Anita van Staa, Tjeerd Sitlani, Colleen M. Rice, Kenneth M. Maitland-van der Zee, Anke-Hilse Wadelius, Mia Morris, Andrew P. Pirmohamed, Munir Palmer, Colin A. N. Psaty, Bruce M. Alfirevic, Ana PLoS One Research Article AIMS: Statin-related myopathy (SRM), which includes rhabdomyolysis, is an uncommon but important adverse drug reaction because the number of people prescribed statins world-wide is large. Previous association studies of common genetic variants have had limited success in identifying a genetic basis for this adverse drug reaction. We conducted a multi-site whole-exome sequencing study to investigate whether rare coding variants confer an increased risk of SRM. METHODS AND RESULTS: SRM 3–5 cases (N = 505) and statin treatment-tolerant controls (N = 2047) were recruited from multiple sites in North America and Europe. SRM 3–5 was defined as symptoms consistent with muscle injury and an elevated creatine phosphokinase level >4 times upper limit of normal without another likely cause of muscle injury. Whole-exome sequencing and variant calling was coordinated from two analysis centres, and results of single-variant and gene-based burden tests were meta-analysed. No genome-wide significant associations were identified. Given the large number of cases, we had 80% power to identify a variant with minor allele frequency of 0.01 that increases the risk of SRM 6-fold at genome-wide significance. CONCLUSIONS: In this large whole-exome sequencing study of severe statin-related muscle injury conducted to date, we did not find evidence that rare coding variants are responsible for this adverse drug reaction. Larger sample sizes would be required to identify rare variants with small effects, but it is unclear whether such findings would be clinically actionable. Public Library of Science 2019-06-26 /pmc/articles/PMC6594672/ /pubmed/31242253 http://dx.doi.org/10.1371/journal.pone.0218115 Text en © 2019 Floyd et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Floyd, James S. Bloch, Katarzyna M. Brody, Jennifer A. Maroteau, Cyrielle Siddiqui, Moneeza K. Gregory, Richard Carr, Daniel F. Molokhia, Mariam Liu, Xiaoming Bis, Joshua C. Ahmed, Ammar Liu, Xuan Hallberg, Pär Yue, Qun-Ying Magnusson, Patrik K. E. Brisson, Diane Wiggins, Kerri L. Morrison, Alanna C. Khoury, Etienne McKeigue, Paul Stricker, Bruno H. Lapeyre-Mestre, Maryse Heckbert, Susan R. Gallagher, Arlene M. Chinoy, Hector Gibbs, Richard A. Bondon-Guitton, Emmanuelle Tracy, Russell Boerwinkle, Eric Gaudet, Daniel Conforti, Anita van Staa, Tjeerd Sitlani, Colleen M. Rice, Kenneth M. Maitland-van der Zee, Anke-Hilse Wadelius, Mia Morris, Andrew P. Pirmohamed, Munir Palmer, Colin A. N. Psaty, Bruce M. Alfirevic, Ana Pharmacogenomics of statin-related myopathy: Meta-analysis of rare variants from whole-exome sequencing |
title | Pharmacogenomics of statin-related myopathy: Meta-analysis of rare variants from whole-exome sequencing |
title_full | Pharmacogenomics of statin-related myopathy: Meta-analysis of rare variants from whole-exome sequencing |
title_fullStr | Pharmacogenomics of statin-related myopathy: Meta-analysis of rare variants from whole-exome sequencing |
title_full_unstemmed | Pharmacogenomics of statin-related myopathy: Meta-analysis of rare variants from whole-exome sequencing |
title_short | Pharmacogenomics of statin-related myopathy: Meta-analysis of rare variants from whole-exome sequencing |
title_sort | pharmacogenomics of statin-related myopathy: meta-analysis of rare variants from whole-exome sequencing |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6594672/ https://www.ncbi.nlm.nih.gov/pubmed/31242253 http://dx.doi.org/10.1371/journal.pone.0218115 |
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