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Pharmacogenomics of statin-related myopathy: Meta-analysis of rare variants from whole-exome sequencing

AIMS: Statin-related myopathy (SRM), which includes rhabdomyolysis, is an uncommon but important adverse drug reaction because the number of people prescribed statins world-wide is large. Previous association studies of common genetic variants have had limited success in identifying a genetic basis...

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Autores principales: Floyd, James S., Bloch, Katarzyna M., Brody, Jennifer A., Maroteau, Cyrielle, Siddiqui, Moneeza K., Gregory, Richard, Carr, Daniel F., Molokhia, Mariam, Liu, Xiaoming, Bis, Joshua C., Ahmed, Ammar, Liu, Xuan, Hallberg, Pär, Yue, Qun-Ying, Magnusson, Patrik K. E., Brisson, Diane, Wiggins, Kerri L., Morrison, Alanna C., Khoury, Etienne, McKeigue, Paul, Stricker, Bruno H., Lapeyre-Mestre, Maryse, Heckbert, Susan R., Gallagher, Arlene M., Chinoy, Hector, Gibbs, Richard A., Bondon-Guitton, Emmanuelle, Tracy, Russell, Boerwinkle, Eric, Gaudet, Daniel, Conforti, Anita, van Staa, Tjeerd, Sitlani, Colleen M., Rice, Kenneth M., Maitland-van der Zee, Anke-Hilse, Wadelius, Mia, Morris, Andrew P., Pirmohamed, Munir, Palmer, Colin A. N., Psaty, Bruce M., Alfirevic, Ana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6594672/
https://www.ncbi.nlm.nih.gov/pubmed/31242253
http://dx.doi.org/10.1371/journal.pone.0218115
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author Floyd, James S.
Bloch, Katarzyna M.
Brody, Jennifer A.
Maroteau, Cyrielle
Siddiqui, Moneeza K.
Gregory, Richard
Carr, Daniel F.
Molokhia, Mariam
Liu, Xiaoming
Bis, Joshua C.
Ahmed, Ammar
Liu, Xuan
Hallberg, Pär
Yue, Qun-Ying
Magnusson, Patrik K. E.
Brisson, Diane
Wiggins, Kerri L.
Morrison, Alanna C.
Khoury, Etienne
McKeigue, Paul
Stricker, Bruno H.
Lapeyre-Mestre, Maryse
Heckbert, Susan R.
Gallagher, Arlene M.
Chinoy, Hector
Gibbs, Richard A.
Bondon-Guitton, Emmanuelle
Tracy, Russell
Boerwinkle, Eric
Gaudet, Daniel
Conforti, Anita
van Staa, Tjeerd
Sitlani, Colleen M.
Rice, Kenneth M.
Maitland-van der Zee, Anke-Hilse
Wadelius, Mia
Morris, Andrew P.
Pirmohamed, Munir
Palmer, Colin A. N.
Psaty, Bruce M.
Alfirevic, Ana
author_facet Floyd, James S.
Bloch, Katarzyna M.
Brody, Jennifer A.
Maroteau, Cyrielle
Siddiqui, Moneeza K.
Gregory, Richard
Carr, Daniel F.
Molokhia, Mariam
Liu, Xiaoming
Bis, Joshua C.
Ahmed, Ammar
Liu, Xuan
Hallberg, Pär
Yue, Qun-Ying
Magnusson, Patrik K. E.
Brisson, Diane
Wiggins, Kerri L.
Morrison, Alanna C.
Khoury, Etienne
McKeigue, Paul
Stricker, Bruno H.
Lapeyre-Mestre, Maryse
Heckbert, Susan R.
Gallagher, Arlene M.
Chinoy, Hector
Gibbs, Richard A.
Bondon-Guitton, Emmanuelle
Tracy, Russell
Boerwinkle, Eric
Gaudet, Daniel
Conforti, Anita
van Staa, Tjeerd
Sitlani, Colleen M.
Rice, Kenneth M.
Maitland-van der Zee, Anke-Hilse
Wadelius, Mia
Morris, Andrew P.
Pirmohamed, Munir
Palmer, Colin A. N.
Psaty, Bruce M.
Alfirevic, Ana
author_sort Floyd, James S.
collection PubMed
description AIMS: Statin-related myopathy (SRM), which includes rhabdomyolysis, is an uncommon but important adverse drug reaction because the number of people prescribed statins world-wide is large. Previous association studies of common genetic variants have had limited success in identifying a genetic basis for this adverse drug reaction. We conducted a multi-site whole-exome sequencing study to investigate whether rare coding variants confer an increased risk of SRM. METHODS AND RESULTS: SRM 3–5 cases (N = 505) and statin treatment-tolerant controls (N = 2047) were recruited from multiple sites in North America and Europe. SRM 3–5 was defined as symptoms consistent with muscle injury and an elevated creatine phosphokinase level >4 times upper limit of normal without another likely cause of muscle injury. Whole-exome sequencing and variant calling was coordinated from two analysis centres, and results of single-variant and gene-based burden tests were meta-analysed. No genome-wide significant associations were identified. Given the large number of cases, we had 80% power to identify a variant with minor allele frequency of 0.01 that increases the risk of SRM 6-fold at genome-wide significance. CONCLUSIONS: In this large whole-exome sequencing study of severe statin-related muscle injury conducted to date, we did not find evidence that rare coding variants are responsible for this adverse drug reaction. Larger sample sizes would be required to identify rare variants with small effects, but it is unclear whether such findings would be clinically actionable.
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spelling pubmed-65946722019-07-05 Pharmacogenomics of statin-related myopathy: Meta-analysis of rare variants from whole-exome sequencing Floyd, James S. Bloch, Katarzyna M. Brody, Jennifer A. Maroteau, Cyrielle Siddiqui, Moneeza K. Gregory, Richard Carr, Daniel F. Molokhia, Mariam Liu, Xiaoming Bis, Joshua C. Ahmed, Ammar Liu, Xuan Hallberg, Pär Yue, Qun-Ying Magnusson, Patrik K. E. Brisson, Diane Wiggins, Kerri L. Morrison, Alanna C. Khoury, Etienne McKeigue, Paul Stricker, Bruno H. Lapeyre-Mestre, Maryse Heckbert, Susan R. Gallagher, Arlene M. Chinoy, Hector Gibbs, Richard A. Bondon-Guitton, Emmanuelle Tracy, Russell Boerwinkle, Eric Gaudet, Daniel Conforti, Anita van Staa, Tjeerd Sitlani, Colleen M. Rice, Kenneth M. Maitland-van der Zee, Anke-Hilse Wadelius, Mia Morris, Andrew P. Pirmohamed, Munir Palmer, Colin A. N. Psaty, Bruce M. Alfirevic, Ana PLoS One Research Article AIMS: Statin-related myopathy (SRM), which includes rhabdomyolysis, is an uncommon but important adverse drug reaction because the number of people prescribed statins world-wide is large. Previous association studies of common genetic variants have had limited success in identifying a genetic basis for this adverse drug reaction. We conducted a multi-site whole-exome sequencing study to investigate whether rare coding variants confer an increased risk of SRM. METHODS AND RESULTS: SRM 3–5 cases (N = 505) and statin treatment-tolerant controls (N = 2047) were recruited from multiple sites in North America and Europe. SRM 3–5 was defined as symptoms consistent with muscle injury and an elevated creatine phosphokinase level >4 times upper limit of normal without another likely cause of muscle injury. Whole-exome sequencing and variant calling was coordinated from two analysis centres, and results of single-variant and gene-based burden tests were meta-analysed. No genome-wide significant associations were identified. Given the large number of cases, we had 80% power to identify a variant with minor allele frequency of 0.01 that increases the risk of SRM 6-fold at genome-wide significance. CONCLUSIONS: In this large whole-exome sequencing study of severe statin-related muscle injury conducted to date, we did not find evidence that rare coding variants are responsible for this adverse drug reaction. Larger sample sizes would be required to identify rare variants with small effects, but it is unclear whether such findings would be clinically actionable. Public Library of Science 2019-06-26 /pmc/articles/PMC6594672/ /pubmed/31242253 http://dx.doi.org/10.1371/journal.pone.0218115 Text en © 2019 Floyd et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Floyd, James S.
Bloch, Katarzyna M.
Brody, Jennifer A.
Maroteau, Cyrielle
Siddiqui, Moneeza K.
Gregory, Richard
Carr, Daniel F.
Molokhia, Mariam
Liu, Xiaoming
Bis, Joshua C.
Ahmed, Ammar
Liu, Xuan
Hallberg, Pär
Yue, Qun-Ying
Magnusson, Patrik K. E.
Brisson, Diane
Wiggins, Kerri L.
Morrison, Alanna C.
Khoury, Etienne
McKeigue, Paul
Stricker, Bruno H.
Lapeyre-Mestre, Maryse
Heckbert, Susan R.
Gallagher, Arlene M.
Chinoy, Hector
Gibbs, Richard A.
Bondon-Guitton, Emmanuelle
Tracy, Russell
Boerwinkle, Eric
Gaudet, Daniel
Conforti, Anita
van Staa, Tjeerd
Sitlani, Colleen M.
Rice, Kenneth M.
Maitland-van der Zee, Anke-Hilse
Wadelius, Mia
Morris, Andrew P.
Pirmohamed, Munir
Palmer, Colin A. N.
Psaty, Bruce M.
Alfirevic, Ana
Pharmacogenomics of statin-related myopathy: Meta-analysis of rare variants from whole-exome sequencing
title Pharmacogenomics of statin-related myopathy: Meta-analysis of rare variants from whole-exome sequencing
title_full Pharmacogenomics of statin-related myopathy: Meta-analysis of rare variants from whole-exome sequencing
title_fullStr Pharmacogenomics of statin-related myopathy: Meta-analysis of rare variants from whole-exome sequencing
title_full_unstemmed Pharmacogenomics of statin-related myopathy: Meta-analysis of rare variants from whole-exome sequencing
title_short Pharmacogenomics of statin-related myopathy: Meta-analysis of rare variants from whole-exome sequencing
title_sort pharmacogenomics of statin-related myopathy: meta-analysis of rare variants from whole-exome sequencing
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6594672/
https://www.ncbi.nlm.nih.gov/pubmed/31242253
http://dx.doi.org/10.1371/journal.pone.0218115
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