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Direct Detection of Heterotrophic Diazotrophs Associated with Planktonic Aggregates
N(2) fixation by planktonic heterotrophic diazotrophs is more wide spread than previously thought, including environments considered “unfavorable” for diazotrophy. These environments include a substantial fraction of the aquatic biosphere such as eutrophic estuaries with high ambient nitrogen concen...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6594930/ https://www.ncbi.nlm.nih.gov/pubmed/31243322 http://dx.doi.org/10.1038/s41598-019-45505-4 |
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author | Geisler, Eyal Bogler, Anne Rahav, Eyal Bar-Zeev, Edo |
author_facet | Geisler, Eyal Bogler, Anne Rahav, Eyal Bar-Zeev, Edo |
author_sort | Geisler, Eyal |
collection | PubMed |
description | N(2) fixation by planktonic heterotrophic diazotrophs is more wide spread than previously thought, including environments considered “unfavorable” for diazotrophy. These environments include a substantial fraction of the aquatic biosphere such as eutrophic estuaries with high ambient nitrogen concentrations and oxidized aphotic water. Different studies suggested that heterotrophic diazotrophs associated with aggregates may promote N(2) fixation in such environments. However, this association was never validated directly and relies mainly on indirect relationships and different statistical approaches. Here, we identified, for the first time, a direct link between active heterotrophic diazotrophs and aggregates that comprise polysaccharides. Our new staining method combines fluorescent tagging of active diazotrophs by nitrogenase-immunolabeling, polysaccharides staining by Alcian blue or concanavalin-A, and total bacteria via nucleic-acid staining. Concomitant to N(2) fixation rates and bacterial activity, this new method provided specific localization of heterotrophic diazotrophs on artificial and natural aggregates. We postulate that the insights gained by this new visualization approach will have a broad significance for future research on the aquatic nitrogen cycle, including environments in which diazotrophy has traditionally been overlooked. |
format | Online Article Text |
id | pubmed-6594930 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-65949302019-07-03 Direct Detection of Heterotrophic Diazotrophs Associated with Planktonic Aggregates Geisler, Eyal Bogler, Anne Rahav, Eyal Bar-Zeev, Edo Sci Rep Article N(2) fixation by planktonic heterotrophic diazotrophs is more wide spread than previously thought, including environments considered “unfavorable” for diazotrophy. These environments include a substantial fraction of the aquatic biosphere such as eutrophic estuaries with high ambient nitrogen concentrations and oxidized aphotic water. Different studies suggested that heterotrophic diazotrophs associated with aggregates may promote N(2) fixation in such environments. However, this association was never validated directly and relies mainly on indirect relationships and different statistical approaches. Here, we identified, for the first time, a direct link between active heterotrophic diazotrophs and aggregates that comprise polysaccharides. Our new staining method combines fluorescent tagging of active diazotrophs by nitrogenase-immunolabeling, polysaccharides staining by Alcian blue or concanavalin-A, and total bacteria via nucleic-acid staining. Concomitant to N(2) fixation rates and bacterial activity, this new method provided specific localization of heterotrophic diazotrophs on artificial and natural aggregates. We postulate that the insights gained by this new visualization approach will have a broad significance for future research on the aquatic nitrogen cycle, including environments in which diazotrophy has traditionally been overlooked. Nature Publishing Group UK 2019-06-26 /pmc/articles/PMC6594930/ /pubmed/31243322 http://dx.doi.org/10.1038/s41598-019-45505-4 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Geisler, Eyal Bogler, Anne Rahav, Eyal Bar-Zeev, Edo Direct Detection of Heterotrophic Diazotrophs Associated with Planktonic Aggregates |
title | Direct Detection of Heterotrophic Diazotrophs Associated with Planktonic Aggregates |
title_full | Direct Detection of Heterotrophic Diazotrophs Associated with Planktonic Aggregates |
title_fullStr | Direct Detection of Heterotrophic Diazotrophs Associated with Planktonic Aggregates |
title_full_unstemmed | Direct Detection of Heterotrophic Diazotrophs Associated with Planktonic Aggregates |
title_short | Direct Detection of Heterotrophic Diazotrophs Associated with Planktonic Aggregates |
title_sort | direct detection of heterotrophic diazotrophs associated with planktonic aggregates |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6594930/ https://www.ncbi.nlm.nih.gov/pubmed/31243322 http://dx.doi.org/10.1038/s41598-019-45505-4 |
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