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Phylogenetic analysis highlights the role of older people in the transmission of HIV-1 in Fuyang, Anhui Province, China

BACKGROUND: The proportion of older HIV-1 infected people in China has increased rapidly in recent years. Elucidation of the transmission characteristics of this high-risk population subgroup is helpful for the development of tailored interventions. METHODS: A phylogenetic analysis was performed tha...

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Autores principales: Wu, Jianjun, Zhang, Yu, Shen, Yuelan, Wang, Xiaolin, Xing, Hui, Yang, Xiaohui, Ding, Xinping, Hu, Bing, Li, Hanping, Han, Jingwan, Li, Jingyun, Su, Bin, Liu, Yongjian, Li, Lin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6598234/
https://www.ncbi.nlm.nih.gov/pubmed/31248372
http://dx.doi.org/10.1186/s12879-019-4187-9
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author Wu, Jianjun
Zhang, Yu
Shen, Yuelan
Wang, Xiaolin
Xing, Hui
Yang, Xiaohui
Ding, Xinping
Hu, Bing
Li, Hanping
Han, Jingwan
Li, Jingyun
Su, Bin
Liu, Yongjian
Li, Lin
author_facet Wu, Jianjun
Zhang, Yu
Shen, Yuelan
Wang, Xiaolin
Xing, Hui
Yang, Xiaohui
Ding, Xinping
Hu, Bing
Li, Hanping
Han, Jingwan
Li, Jingyun
Su, Bin
Liu, Yongjian
Li, Lin
author_sort Wu, Jianjun
collection PubMed
description BACKGROUND: The proportion of older HIV-1 infected people in China has increased rapidly in recent years. Elucidation of the transmission characteristics of this high-risk population subgroup is helpful for the development of tailored interventions. METHODS: A phylogenetic analysis was performed that uses available HIV-1 pol sequences amplified with nested RT-PCR from plasma samples of all newly diagnosed participants spanning from October 2017 to September 2018 in Fuyang, Anhui Province. Transmission clusters were identified as two or more sequences that shared a corresponding node with an aLRT-SH value ≥90 in the maximum-likelihood phylogenetic tree and had an overall mean genetic distance of ≤1.5%. A local transmission cluster was defined as a cluster that had more than 80% of its sequences from Fuyang. The role of older people in local HIV-1 transmission was determined using an integration of molecular and demographic data. RESULTS: Of 362 available sequences, 14 subtypes, and 28 local transmission clusters were identified. It was found that the proportion of older people in the local transmission cluster (69/77, 89.61%) was much higher than that of younger people (46/114, 40.35%) (χ(2) test, P < 0.001). In the pretreatment drug resistance analysis, the proportion of sequences with PDRMs in the local transmission cluster was not significantly different between the older people group (57.14%, 4/7) and non-old-aged group (11.11%, 1/9) (Fisher’s exact test, P > 0.05). CONCLUSION: By combining phylogenetic analyses with demographic data, more detailed information was provided about the local transmission structure in Fuyang. These findings suggested that older people play an important role in local transmission, and more tailored interventions for this population subgroup are urgently needed.
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spelling pubmed-65982342019-07-11 Phylogenetic analysis highlights the role of older people in the transmission of HIV-1 in Fuyang, Anhui Province, China Wu, Jianjun Zhang, Yu Shen, Yuelan Wang, Xiaolin Xing, Hui Yang, Xiaohui Ding, Xinping Hu, Bing Li, Hanping Han, Jingwan Li, Jingyun Su, Bin Liu, Yongjian Li, Lin BMC Infect Dis Research Article BACKGROUND: The proportion of older HIV-1 infected people in China has increased rapidly in recent years. Elucidation of the transmission characteristics of this high-risk population subgroup is helpful for the development of tailored interventions. METHODS: A phylogenetic analysis was performed that uses available HIV-1 pol sequences amplified with nested RT-PCR from plasma samples of all newly diagnosed participants spanning from October 2017 to September 2018 in Fuyang, Anhui Province. Transmission clusters were identified as two or more sequences that shared a corresponding node with an aLRT-SH value ≥90 in the maximum-likelihood phylogenetic tree and had an overall mean genetic distance of ≤1.5%. A local transmission cluster was defined as a cluster that had more than 80% of its sequences from Fuyang. The role of older people in local HIV-1 transmission was determined using an integration of molecular and demographic data. RESULTS: Of 362 available sequences, 14 subtypes, and 28 local transmission clusters were identified. It was found that the proportion of older people in the local transmission cluster (69/77, 89.61%) was much higher than that of younger people (46/114, 40.35%) (χ(2) test, P < 0.001). In the pretreatment drug resistance analysis, the proportion of sequences with PDRMs in the local transmission cluster was not significantly different between the older people group (57.14%, 4/7) and non-old-aged group (11.11%, 1/9) (Fisher’s exact test, P > 0.05). CONCLUSION: By combining phylogenetic analyses with demographic data, more detailed information was provided about the local transmission structure in Fuyang. These findings suggested that older people play an important role in local transmission, and more tailored interventions for this population subgroup are urgently needed. BioMed Central 2019-06-27 /pmc/articles/PMC6598234/ /pubmed/31248372 http://dx.doi.org/10.1186/s12879-019-4187-9 Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Wu, Jianjun
Zhang, Yu
Shen, Yuelan
Wang, Xiaolin
Xing, Hui
Yang, Xiaohui
Ding, Xinping
Hu, Bing
Li, Hanping
Han, Jingwan
Li, Jingyun
Su, Bin
Liu, Yongjian
Li, Lin
Phylogenetic analysis highlights the role of older people in the transmission of HIV-1 in Fuyang, Anhui Province, China
title Phylogenetic analysis highlights the role of older people in the transmission of HIV-1 in Fuyang, Anhui Province, China
title_full Phylogenetic analysis highlights the role of older people in the transmission of HIV-1 in Fuyang, Anhui Province, China
title_fullStr Phylogenetic analysis highlights the role of older people in the transmission of HIV-1 in Fuyang, Anhui Province, China
title_full_unstemmed Phylogenetic analysis highlights the role of older people in the transmission of HIV-1 in Fuyang, Anhui Province, China
title_short Phylogenetic analysis highlights the role of older people in the transmission of HIV-1 in Fuyang, Anhui Province, China
title_sort phylogenetic analysis highlights the role of older people in the transmission of hiv-1 in fuyang, anhui province, china
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6598234/
https://www.ncbi.nlm.nih.gov/pubmed/31248372
http://dx.doi.org/10.1186/s12879-019-4187-9
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