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Reorientational Dynamics of Amyloid-β from NMR Spin Relaxation and Molecular Simulation
[Image: see text] Amyloid-β (Aβ) aggregation is a hallmark of Alzheimer’s disease. As an intrinsically disordered protein, Aβ undergoes extensive dynamics on multiple length and time scales. Access to a comprehensive picture of the reorientational dynamics in Aβ requires therefore the combination of...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2019
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6598774/ https://www.ncbi.nlm.nih.gov/pubmed/31181936 http://dx.doi.org/10.1021/acs.jpclett.9b01050 |
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author | Rezaei-Ghaleh, Nasrollah Parigi, Giacomo Zweckstetter, Markus |
author_facet | Rezaei-Ghaleh, Nasrollah Parigi, Giacomo Zweckstetter, Markus |
author_sort | Rezaei-Ghaleh, Nasrollah |
collection | PubMed |
description | [Image: see text] Amyloid-β (Aβ) aggregation is a hallmark of Alzheimer’s disease. As an intrinsically disordered protein, Aβ undergoes extensive dynamics on multiple length and time scales. Access to a comprehensive picture of the reorientational dynamics in Aβ requires therefore the combination of complementary techniques. Here, we integrate (15)N spin relaxation rates at three magnetic fields with microseconds-long molecular dynamics simulation, ensemble-based hydrodynamic calculations, and previously published nanosecond fluorescence correlation spectroscopy to investigate the reorientational dynamics of Aβ1–40 (Aβ40) at single-residue resolution. The integrative analysis shows that librational and dihedral angle fluctuations occurring at fast and intermediate time scales are not sufficient to decorrelate orientational memory in Aβ40. Instead, slow segmental motions occurring at ∼5 ns are detected throughout the Aβ40 sequence and reach up to ∼10 ns for selected residues. We propose that the modulation of time scales of reorientational dynamics with respect to intra- and intermolecular diffusion plays an important role in disease-related Aβ aggregation. |
format | Online Article Text |
id | pubmed-6598774 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-65987742019-07-01 Reorientational Dynamics of Amyloid-β from NMR Spin Relaxation and Molecular Simulation Rezaei-Ghaleh, Nasrollah Parigi, Giacomo Zweckstetter, Markus J Phys Chem Lett [Image: see text] Amyloid-β (Aβ) aggregation is a hallmark of Alzheimer’s disease. As an intrinsically disordered protein, Aβ undergoes extensive dynamics on multiple length and time scales. Access to a comprehensive picture of the reorientational dynamics in Aβ requires therefore the combination of complementary techniques. Here, we integrate (15)N spin relaxation rates at three magnetic fields with microseconds-long molecular dynamics simulation, ensemble-based hydrodynamic calculations, and previously published nanosecond fluorescence correlation spectroscopy to investigate the reorientational dynamics of Aβ1–40 (Aβ40) at single-residue resolution. The integrative analysis shows that librational and dihedral angle fluctuations occurring at fast and intermediate time scales are not sufficient to decorrelate orientational memory in Aβ40. Instead, slow segmental motions occurring at ∼5 ns are detected throughout the Aβ40 sequence and reach up to ∼10 ns for selected residues. We propose that the modulation of time scales of reorientational dynamics with respect to intra- and intermolecular diffusion plays an important role in disease-related Aβ aggregation. American Chemical Society 2019-06-03 2019-06-20 /pmc/articles/PMC6598774/ /pubmed/31181936 http://dx.doi.org/10.1021/acs.jpclett.9b01050 Text en Copyright © 2019 American Chemical Society This is an open access article published under a Creative Commons Attribution (CC-BY) License (http://pubs.acs.org/page/policy/authorchoice_ccby_termsofuse.html) , which permits unrestricted use, distribution and reproduction in any medium, provided the author and source are cited. |
spellingShingle | Rezaei-Ghaleh, Nasrollah Parigi, Giacomo Zweckstetter, Markus Reorientational Dynamics of Amyloid-β from NMR Spin Relaxation and Molecular Simulation |
title | Reorientational Dynamics of Amyloid-β
from NMR Spin Relaxation and Molecular Simulation |
title_full | Reorientational Dynamics of Amyloid-β
from NMR Spin Relaxation and Molecular Simulation |
title_fullStr | Reorientational Dynamics of Amyloid-β
from NMR Spin Relaxation and Molecular Simulation |
title_full_unstemmed | Reorientational Dynamics of Amyloid-β
from NMR Spin Relaxation and Molecular Simulation |
title_short | Reorientational Dynamics of Amyloid-β
from NMR Spin Relaxation and Molecular Simulation |
title_sort | reorientational dynamics of amyloid-β
from nmr spin relaxation and molecular simulation |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6598774/ https://www.ncbi.nlm.nih.gov/pubmed/31181936 http://dx.doi.org/10.1021/acs.jpclett.9b01050 |
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