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Reorientational Dynamics of Amyloid-β from NMR Spin Relaxation and Molecular Simulation

[Image: see text] Amyloid-β (Aβ) aggregation is a hallmark of Alzheimer’s disease. As an intrinsically disordered protein, Aβ undergoes extensive dynamics on multiple length and time scales. Access to a comprehensive picture of the reorientational dynamics in Aβ requires therefore the combination of...

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Autores principales: Rezaei-Ghaleh, Nasrollah, Parigi, Giacomo, Zweckstetter, Markus
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2019
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6598774/
https://www.ncbi.nlm.nih.gov/pubmed/31181936
http://dx.doi.org/10.1021/acs.jpclett.9b01050
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author Rezaei-Ghaleh, Nasrollah
Parigi, Giacomo
Zweckstetter, Markus
author_facet Rezaei-Ghaleh, Nasrollah
Parigi, Giacomo
Zweckstetter, Markus
author_sort Rezaei-Ghaleh, Nasrollah
collection PubMed
description [Image: see text] Amyloid-β (Aβ) aggregation is a hallmark of Alzheimer’s disease. As an intrinsically disordered protein, Aβ undergoes extensive dynamics on multiple length and time scales. Access to a comprehensive picture of the reorientational dynamics in Aβ requires therefore the combination of complementary techniques. Here, we integrate (15)N spin relaxation rates at three magnetic fields with microseconds-long molecular dynamics simulation, ensemble-based hydrodynamic calculations, and previously published nanosecond fluorescence correlation spectroscopy to investigate the reorientational dynamics of Aβ1–40 (Aβ40) at single-residue resolution. The integrative analysis shows that librational and dihedral angle fluctuations occurring at fast and intermediate time scales are not sufficient to decorrelate orientational memory in Aβ40. Instead, slow segmental motions occurring at ∼5 ns are detected throughout the Aβ40 sequence and reach up to ∼10 ns for selected residues. We propose that the modulation of time scales of reorientational dynamics with respect to intra- and intermolecular diffusion plays an important role in disease-related Aβ aggregation.
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spelling pubmed-65987742019-07-01 Reorientational Dynamics of Amyloid-β from NMR Spin Relaxation and Molecular Simulation Rezaei-Ghaleh, Nasrollah Parigi, Giacomo Zweckstetter, Markus J Phys Chem Lett [Image: see text] Amyloid-β (Aβ) aggregation is a hallmark of Alzheimer’s disease. As an intrinsically disordered protein, Aβ undergoes extensive dynamics on multiple length and time scales. Access to a comprehensive picture of the reorientational dynamics in Aβ requires therefore the combination of complementary techniques. Here, we integrate (15)N spin relaxation rates at three magnetic fields with microseconds-long molecular dynamics simulation, ensemble-based hydrodynamic calculations, and previously published nanosecond fluorescence correlation spectroscopy to investigate the reorientational dynamics of Aβ1–40 (Aβ40) at single-residue resolution. The integrative analysis shows that librational and dihedral angle fluctuations occurring at fast and intermediate time scales are not sufficient to decorrelate orientational memory in Aβ40. Instead, slow segmental motions occurring at ∼5 ns are detected throughout the Aβ40 sequence and reach up to ∼10 ns for selected residues. We propose that the modulation of time scales of reorientational dynamics with respect to intra- and intermolecular diffusion plays an important role in disease-related Aβ aggregation. American Chemical Society 2019-06-03 2019-06-20 /pmc/articles/PMC6598774/ /pubmed/31181936 http://dx.doi.org/10.1021/acs.jpclett.9b01050 Text en Copyright © 2019 American Chemical Society This is an open access article published under a Creative Commons Attribution (CC-BY) License (http://pubs.acs.org/page/policy/authorchoice_ccby_termsofuse.html) , which permits unrestricted use, distribution and reproduction in any medium, provided the author and source are cited.
spellingShingle Rezaei-Ghaleh, Nasrollah
Parigi, Giacomo
Zweckstetter, Markus
Reorientational Dynamics of Amyloid-β from NMR Spin Relaxation and Molecular Simulation
title Reorientational Dynamics of Amyloid-β from NMR Spin Relaxation and Molecular Simulation
title_full Reorientational Dynamics of Amyloid-β from NMR Spin Relaxation and Molecular Simulation
title_fullStr Reorientational Dynamics of Amyloid-β from NMR Spin Relaxation and Molecular Simulation
title_full_unstemmed Reorientational Dynamics of Amyloid-β from NMR Spin Relaxation and Molecular Simulation
title_short Reorientational Dynamics of Amyloid-β from NMR Spin Relaxation and Molecular Simulation
title_sort reorientational dynamics of amyloid-β from nmr spin relaxation and molecular simulation
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6598774/
https://www.ncbi.nlm.nih.gov/pubmed/31181936
http://dx.doi.org/10.1021/acs.jpclett.9b01050
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