Cargando…

Investigation by DFT Methods of the Damage of Human Serum Albumin Including Amino Acid Derivative Schiff Base Zn(II) Complexes by IR-FEL Irradiation

An infrared free electron laser (IR-FEL) can decompose aggregated proteins by excitation of vibrational bands. In this study, we prepared hybrid materials of protein (human serum albumin; HSA) including several new Schiff base Zn(II) complexes incorporating amino acid (alanine and valine) or dipepti...

Descripción completa

Detalles Bibliográficos
Autores principales: Onami, Yuika, Koya, Ryousuke, Kawasaki, Takayasu, Aizawa, Hiroki, Nakagame, Ryo, Miyagawa, Yoshito, Haraguchi, Tomoyuki, Akitsu, Takashiro, Tsukiyama, Koichi, Palafox, Mauricio A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6600442/
https://www.ncbi.nlm.nih.gov/pubmed/31212677
http://dx.doi.org/10.3390/ijms20112846
_version_ 1783431117174472704
author Onami, Yuika
Koya, Ryousuke
Kawasaki, Takayasu
Aizawa, Hiroki
Nakagame, Ryo
Miyagawa, Yoshito
Haraguchi, Tomoyuki
Akitsu, Takashiro
Tsukiyama, Koichi
Palafox, Mauricio A.
author_facet Onami, Yuika
Koya, Ryousuke
Kawasaki, Takayasu
Aizawa, Hiroki
Nakagame, Ryo
Miyagawa, Yoshito
Haraguchi, Tomoyuki
Akitsu, Takashiro
Tsukiyama, Koichi
Palafox, Mauricio A.
author_sort Onami, Yuika
collection PubMed
description An infrared free electron laser (IR-FEL) can decompose aggregated proteins by excitation of vibrational bands. In this study, we prepared hybrid materials of protein (human serum albumin; HSA) including several new Schiff base Zn(II) complexes incorporating amino acid (alanine and valine) or dipeptide (gly-gly) derivative moieties, which were synthesized and characterized with UV-vis, circular dichroism (CD), and IR spectra. Density functional theory (DFT) and time dependent DFT (TD-DFT) calculations were also performed to investigate vibrational modes of the Zn(II) complexes. An IR-FEL was used to irradiate HSA as well as hybrid materials of HSA-Zn(II) complexes at wavelengths corresponding to imine C=N, amide I, and amide II bands. Analysis of secondary structures suggested that including a Zn(II) complex into HSA led to the structural change of HSA, resulting in a more fragile structure than the original HSA. The result was one of the characteristic features of vibrational excitation of IR-FEL in contrast to electronic excitation by UV or visible light.
format Online
Article
Text
id pubmed-6600442
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-66004422019-07-16 Investigation by DFT Methods of the Damage of Human Serum Albumin Including Amino Acid Derivative Schiff Base Zn(II) Complexes by IR-FEL Irradiation Onami, Yuika Koya, Ryousuke Kawasaki, Takayasu Aizawa, Hiroki Nakagame, Ryo Miyagawa, Yoshito Haraguchi, Tomoyuki Akitsu, Takashiro Tsukiyama, Koichi Palafox, Mauricio A. Int J Mol Sci Article An infrared free electron laser (IR-FEL) can decompose aggregated proteins by excitation of vibrational bands. In this study, we prepared hybrid materials of protein (human serum albumin; HSA) including several new Schiff base Zn(II) complexes incorporating amino acid (alanine and valine) or dipeptide (gly-gly) derivative moieties, which were synthesized and characterized with UV-vis, circular dichroism (CD), and IR spectra. Density functional theory (DFT) and time dependent DFT (TD-DFT) calculations were also performed to investigate vibrational modes of the Zn(II) complexes. An IR-FEL was used to irradiate HSA as well as hybrid materials of HSA-Zn(II) complexes at wavelengths corresponding to imine C=N, amide I, and amide II bands. Analysis of secondary structures suggested that including a Zn(II) complex into HSA led to the structural change of HSA, resulting in a more fragile structure than the original HSA. The result was one of the characteristic features of vibrational excitation of IR-FEL in contrast to electronic excitation by UV or visible light. MDPI 2019-06-11 /pmc/articles/PMC6600442/ /pubmed/31212677 http://dx.doi.org/10.3390/ijms20112846 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Onami, Yuika
Koya, Ryousuke
Kawasaki, Takayasu
Aizawa, Hiroki
Nakagame, Ryo
Miyagawa, Yoshito
Haraguchi, Tomoyuki
Akitsu, Takashiro
Tsukiyama, Koichi
Palafox, Mauricio A.
Investigation by DFT Methods of the Damage of Human Serum Albumin Including Amino Acid Derivative Schiff Base Zn(II) Complexes by IR-FEL Irradiation
title Investigation by DFT Methods of the Damage of Human Serum Albumin Including Amino Acid Derivative Schiff Base Zn(II) Complexes by IR-FEL Irradiation
title_full Investigation by DFT Methods of the Damage of Human Serum Albumin Including Amino Acid Derivative Schiff Base Zn(II) Complexes by IR-FEL Irradiation
title_fullStr Investigation by DFT Methods of the Damage of Human Serum Albumin Including Amino Acid Derivative Schiff Base Zn(II) Complexes by IR-FEL Irradiation
title_full_unstemmed Investigation by DFT Methods of the Damage of Human Serum Albumin Including Amino Acid Derivative Schiff Base Zn(II) Complexes by IR-FEL Irradiation
title_short Investigation by DFT Methods of the Damage of Human Serum Albumin Including Amino Acid Derivative Schiff Base Zn(II) Complexes by IR-FEL Irradiation
title_sort investigation by dft methods of the damage of human serum albumin including amino acid derivative schiff base zn(ii) complexes by ir-fel irradiation
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6600442/
https://www.ncbi.nlm.nih.gov/pubmed/31212677
http://dx.doi.org/10.3390/ijms20112846
work_keys_str_mv AT onamiyuika investigationbydftmethodsofthedamageofhumanserumalbuminincludingaminoacidderivativeschiffbasezniicomplexesbyirfelirradiation
AT koyaryousuke investigationbydftmethodsofthedamageofhumanserumalbuminincludingaminoacidderivativeschiffbasezniicomplexesbyirfelirradiation
AT kawasakitakayasu investigationbydftmethodsofthedamageofhumanserumalbuminincludingaminoacidderivativeschiffbasezniicomplexesbyirfelirradiation
AT aizawahiroki investigationbydftmethodsofthedamageofhumanserumalbuminincludingaminoacidderivativeschiffbasezniicomplexesbyirfelirradiation
AT nakagameryo investigationbydftmethodsofthedamageofhumanserumalbuminincludingaminoacidderivativeschiffbasezniicomplexesbyirfelirradiation
AT miyagawayoshito investigationbydftmethodsofthedamageofhumanserumalbuminincludingaminoacidderivativeschiffbasezniicomplexesbyirfelirradiation
AT haraguchitomoyuki investigationbydftmethodsofthedamageofhumanserumalbuminincludingaminoacidderivativeschiffbasezniicomplexesbyirfelirradiation
AT akitsutakashiro investigationbydftmethodsofthedamageofhumanserumalbuminincludingaminoacidderivativeschiffbasezniicomplexesbyirfelirradiation
AT tsukiyamakoichi investigationbydftmethodsofthedamageofhumanserumalbuminincludingaminoacidderivativeschiffbasezniicomplexesbyirfelirradiation
AT palafoxmauricioa investigationbydftmethodsofthedamageofhumanserumalbuminincludingaminoacidderivativeschiffbasezniicomplexesbyirfelirradiation