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Investigation by DFT Methods of the Damage of Human Serum Albumin Including Amino Acid Derivative Schiff Base Zn(II) Complexes by IR-FEL Irradiation
An infrared free electron laser (IR-FEL) can decompose aggregated proteins by excitation of vibrational bands. In this study, we prepared hybrid materials of protein (human serum albumin; HSA) including several new Schiff base Zn(II) complexes incorporating amino acid (alanine and valine) or dipepti...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6600442/ https://www.ncbi.nlm.nih.gov/pubmed/31212677 http://dx.doi.org/10.3390/ijms20112846 |
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author | Onami, Yuika Koya, Ryousuke Kawasaki, Takayasu Aizawa, Hiroki Nakagame, Ryo Miyagawa, Yoshito Haraguchi, Tomoyuki Akitsu, Takashiro Tsukiyama, Koichi Palafox, Mauricio A. |
author_facet | Onami, Yuika Koya, Ryousuke Kawasaki, Takayasu Aizawa, Hiroki Nakagame, Ryo Miyagawa, Yoshito Haraguchi, Tomoyuki Akitsu, Takashiro Tsukiyama, Koichi Palafox, Mauricio A. |
author_sort | Onami, Yuika |
collection | PubMed |
description | An infrared free electron laser (IR-FEL) can decompose aggregated proteins by excitation of vibrational bands. In this study, we prepared hybrid materials of protein (human serum albumin; HSA) including several new Schiff base Zn(II) complexes incorporating amino acid (alanine and valine) or dipeptide (gly-gly) derivative moieties, which were synthesized and characterized with UV-vis, circular dichroism (CD), and IR spectra. Density functional theory (DFT) and time dependent DFT (TD-DFT) calculations were also performed to investigate vibrational modes of the Zn(II) complexes. An IR-FEL was used to irradiate HSA as well as hybrid materials of HSA-Zn(II) complexes at wavelengths corresponding to imine C=N, amide I, and amide II bands. Analysis of secondary structures suggested that including a Zn(II) complex into HSA led to the structural change of HSA, resulting in a more fragile structure than the original HSA. The result was one of the characteristic features of vibrational excitation of IR-FEL in contrast to electronic excitation by UV or visible light. |
format | Online Article Text |
id | pubmed-6600442 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-66004422019-07-16 Investigation by DFT Methods of the Damage of Human Serum Albumin Including Amino Acid Derivative Schiff Base Zn(II) Complexes by IR-FEL Irradiation Onami, Yuika Koya, Ryousuke Kawasaki, Takayasu Aizawa, Hiroki Nakagame, Ryo Miyagawa, Yoshito Haraguchi, Tomoyuki Akitsu, Takashiro Tsukiyama, Koichi Palafox, Mauricio A. Int J Mol Sci Article An infrared free electron laser (IR-FEL) can decompose aggregated proteins by excitation of vibrational bands. In this study, we prepared hybrid materials of protein (human serum albumin; HSA) including several new Schiff base Zn(II) complexes incorporating amino acid (alanine and valine) or dipeptide (gly-gly) derivative moieties, which were synthesized and characterized with UV-vis, circular dichroism (CD), and IR spectra. Density functional theory (DFT) and time dependent DFT (TD-DFT) calculations were also performed to investigate vibrational modes of the Zn(II) complexes. An IR-FEL was used to irradiate HSA as well as hybrid materials of HSA-Zn(II) complexes at wavelengths corresponding to imine C=N, amide I, and amide II bands. Analysis of secondary structures suggested that including a Zn(II) complex into HSA led to the structural change of HSA, resulting in a more fragile structure than the original HSA. The result was one of the characteristic features of vibrational excitation of IR-FEL in contrast to electronic excitation by UV or visible light. MDPI 2019-06-11 /pmc/articles/PMC6600442/ /pubmed/31212677 http://dx.doi.org/10.3390/ijms20112846 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Onami, Yuika Koya, Ryousuke Kawasaki, Takayasu Aizawa, Hiroki Nakagame, Ryo Miyagawa, Yoshito Haraguchi, Tomoyuki Akitsu, Takashiro Tsukiyama, Koichi Palafox, Mauricio A. Investigation by DFT Methods of the Damage of Human Serum Albumin Including Amino Acid Derivative Schiff Base Zn(II) Complexes by IR-FEL Irradiation |
title | Investigation by DFT Methods of the Damage of Human Serum Albumin Including Amino Acid Derivative Schiff Base Zn(II) Complexes by IR-FEL Irradiation |
title_full | Investigation by DFT Methods of the Damage of Human Serum Albumin Including Amino Acid Derivative Schiff Base Zn(II) Complexes by IR-FEL Irradiation |
title_fullStr | Investigation by DFT Methods of the Damage of Human Serum Albumin Including Amino Acid Derivative Schiff Base Zn(II) Complexes by IR-FEL Irradiation |
title_full_unstemmed | Investigation by DFT Methods of the Damage of Human Serum Albumin Including Amino Acid Derivative Schiff Base Zn(II) Complexes by IR-FEL Irradiation |
title_short | Investigation by DFT Methods of the Damage of Human Serum Albumin Including Amino Acid Derivative Schiff Base Zn(II) Complexes by IR-FEL Irradiation |
title_sort | investigation by dft methods of the damage of human serum albumin including amino acid derivative schiff base zn(ii) complexes by ir-fel irradiation |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6600442/ https://www.ncbi.nlm.nih.gov/pubmed/31212677 http://dx.doi.org/10.3390/ijms20112846 |
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