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Interactive Tree Of Life (iTOL) v4: recent updates and new developments
The Interactive Tree Of Life (https://itol.embl.de) is an online tool for the display, manipulation and annotation of phylogenetic and other trees. It is freely available and open to everyone. The current version introduces four new dataset types, together with numerous new features. Annotation opti...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6602468/ https://www.ncbi.nlm.nih.gov/pubmed/30931475 http://dx.doi.org/10.1093/nar/gkz239 |
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author | Letunic, Ivica Bork, Peer |
author_facet | Letunic, Ivica Bork, Peer |
author_sort | Letunic, Ivica |
collection | PubMed |
description | The Interactive Tree Of Life (https://itol.embl.de) is an online tool for the display, manipulation and annotation of phylogenetic and other trees. It is freely available and open to everyone. The current version introduces four new dataset types, together with numerous new features. Annotation options have been expanded and new control options added for many display elements. An interactive spreadsheet-like editor has been implemented, providing dataset creation and editing directly in the web interface. Font support has been rewritten with full support for UTF-8 character encoding throughout the user interface. Google Web Fonts are now fully supported in the tree text labels. iTOL v4 is the first tool which supports direct visualization of Qiime 2 trees and associated annotations. The user account system has been streamlined and expanded with new navigation options, and currently handles >700 000 trees from more than 40 000 individual users. Full batch access has been implemented allowing programmatic upload and export of trees and annotations. |
format | Online Article Text |
id | pubmed-6602468 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-66024682019-07-05 Interactive Tree Of Life (iTOL) v4: recent updates and new developments Letunic, Ivica Bork, Peer Nucleic Acids Res Web Server Issue The Interactive Tree Of Life (https://itol.embl.de) is an online tool for the display, manipulation and annotation of phylogenetic and other trees. It is freely available and open to everyone. The current version introduces four new dataset types, together with numerous new features. Annotation options have been expanded and new control options added for many display elements. An interactive spreadsheet-like editor has been implemented, providing dataset creation and editing directly in the web interface. Font support has been rewritten with full support for UTF-8 character encoding throughout the user interface. Google Web Fonts are now fully supported in the tree text labels. iTOL v4 is the first tool which supports direct visualization of Qiime 2 trees and associated annotations. The user account system has been streamlined and expanded with new navigation options, and currently handles >700 000 trees from more than 40 000 individual users. Full batch access has been implemented allowing programmatic upload and export of trees and annotations. Oxford University Press 2019-07-02 2019-04-01 /pmc/articles/PMC6602468/ /pubmed/30931475 http://dx.doi.org/10.1093/nar/gkz239 Text en © The Author(s) 2019. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Web Server Issue Letunic, Ivica Bork, Peer Interactive Tree Of Life (iTOL) v4: recent updates and new developments |
title | Interactive Tree Of Life (iTOL) v4: recent updates and new developments |
title_full | Interactive Tree Of Life (iTOL) v4: recent updates and new developments |
title_fullStr | Interactive Tree Of Life (iTOL) v4: recent updates and new developments |
title_full_unstemmed | Interactive Tree Of Life (iTOL) v4: recent updates and new developments |
title_short | Interactive Tree Of Life (iTOL) v4: recent updates and new developments |
title_sort | interactive tree of life (itol) v4: recent updates and new developments |
topic | Web Server Issue |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6602468/ https://www.ncbi.nlm.nih.gov/pubmed/30931475 http://dx.doi.org/10.1093/nar/gkz239 |
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