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Repeatability of Multiparametric Prostate MRI Radiomics Features

In this study we assessed the repeatability of radiomics features on small prostate tumors using test-retest Multiparametric Magnetic Resonance Imaging (mpMRI). The premise of radiomics is that quantitative image-based features can serve as biomarkers for detecting and characterizing disease. For su...

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Autores principales: Schwier, Michael, van Griethuysen, Joost, Vangel, Mark G., Pieper, Steve, Peled, Sharon, Tempany, Clare, Aerts, Hugo J. W. L., Kikinis, Ron, Fennessy, Fiona M., Fedorov, Andriy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6602944/
https://www.ncbi.nlm.nih.gov/pubmed/31263116
http://dx.doi.org/10.1038/s41598-019-45766-z
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author Schwier, Michael
van Griethuysen, Joost
Vangel, Mark G.
Pieper, Steve
Peled, Sharon
Tempany, Clare
Aerts, Hugo J. W. L.
Kikinis, Ron
Fennessy, Fiona M.
Fedorov, Andriy
author_facet Schwier, Michael
van Griethuysen, Joost
Vangel, Mark G.
Pieper, Steve
Peled, Sharon
Tempany, Clare
Aerts, Hugo J. W. L.
Kikinis, Ron
Fennessy, Fiona M.
Fedorov, Andriy
author_sort Schwier, Michael
collection PubMed
description In this study we assessed the repeatability of radiomics features on small prostate tumors using test-retest Multiparametric Magnetic Resonance Imaging (mpMRI). The premise of radiomics is that quantitative image-based features can serve as biomarkers for detecting and characterizing disease. For such biomarkers to be useful, repeatability is a basic requirement, meaning its value must remain stable between two scans, if the conditions remain stable. We investigated repeatability of radiomics features under various preprocessing and extraction configurations including various image normalization schemes, different image pre-filtering, and different bin widths for image discretization. Although we found many radiomics features and preprocessing combinations with high repeatability (Intraclass Correlation Coefficient > 0.85), our results indicate that overall the repeatability is highly sensitive to the processing parameters. Neither image normalization, using a variety of approaches, nor the use of pre-filtering options resulted in consistent improvements in repeatability. We urge caution when interpreting radiomics features and advise paying close attention to the processing configuration details of reported results. Furthermore, we advocate reporting all processing details in radiomics studies and strongly recommend the use of open source implementations.
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spelling pubmed-66029442019-07-14 Repeatability of Multiparametric Prostate MRI Radiomics Features Schwier, Michael van Griethuysen, Joost Vangel, Mark G. Pieper, Steve Peled, Sharon Tempany, Clare Aerts, Hugo J. W. L. Kikinis, Ron Fennessy, Fiona M. Fedorov, Andriy Sci Rep Article In this study we assessed the repeatability of radiomics features on small prostate tumors using test-retest Multiparametric Magnetic Resonance Imaging (mpMRI). The premise of radiomics is that quantitative image-based features can serve as biomarkers for detecting and characterizing disease. For such biomarkers to be useful, repeatability is a basic requirement, meaning its value must remain stable between two scans, if the conditions remain stable. We investigated repeatability of radiomics features under various preprocessing and extraction configurations including various image normalization schemes, different image pre-filtering, and different bin widths for image discretization. Although we found many radiomics features and preprocessing combinations with high repeatability (Intraclass Correlation Coefficient > 0.85), our results indicate that overall the repeatability is highly sensitive to the processing parameters. Neither image normalization, using a variety of approaches, nor the use of pre-filtering options resulted in consistent improvements in repeatability. We urge caution when interpreting radiomics features and advise paying close attention to the processing configuration details of reported results. Furthermore, we advocate reporting all processing details in radiomics studies and strongly recommend the use of open source implementations. Nature Publishing Group UK 2019-07-01 /pmc/articles/PMC6602944/ /pubmed/31263116 http://dx.doi.org/10.1038/s41598-019-45766-z Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Schwier, Michael
van Griethuysen, Joost
Vangel, Mark G.
Pieper, Steve
Peled, Sharon
Tempany, Clare
Aerts, Hugo J. W. L.
Kikinis, Ron
Fennessy, Fiona M.
Fedorov, Andriy
Repeatability of Multiparametric Prostate MRI Radiomics Features
title Repeatability of Multiparametric Prostate MRI Radiomics Features
title_full Repeatability of Multiparametric Prostate MRI Radiomics Features
title_fullStr Repeatability of Multiparametric Prostate MRI Radiomics Features
title_full_unstemmed Repeatability of Multiparametric Prostate MRI Radiomics Features
title_short Repeatability of Multiparametric Prostate MRI Radiomics Features
title_sort repeatability of multiparametric prostate mri radiomics features
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6602944/
https://www.ncbi.nlm.nih.gov/pubmed/31263116
http://dx.doi.org/10.1038/s41598-019-45766-z
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