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Radiomics based likelihood functions for cancer diagnosis

Radiomic features based classifiers and neural networks have shown promising results in tumor classification. The classification performance can be further improved greatly by exploring and incorporating the discriminative features towards cancer into mathematical models. In this research work, we h...

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Autores principales: Shakir, Hina, Deng, Yiming, Rasheed, Haroon, Khan, Tariq Mairaj Rasool
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6603029/
https://www.ncbi.nlm.nih.gov/pubmed/31263186
http://dx.doi.org/10.1038/s41598-019-45053-x
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author Shakir, Hina
Deng, Yiming
Rasheed, Haroon
Khan, Tariq Mairaj Rasool
author_facet Shakir, Hina
Deng, Yiming
Rasheed, Haroon
Khan, Tariq Mairaj Rasool
author_sort Shakir, Hina
collection PubMed
description Radiomic features based classifiers and neural networks have shown promising results in tumor classification. The classification performance can be further improved greatly by exploring and incorporating the discriminative features towards cancer into mathematical models. In this research work, we have developed two radiomics driven likelihood models in Computed Tomography(CT) images to classify lung, colon, head and neck cancer. Initially, two diagnostic radiomic signatures were derived by extracting 105 3-D features from 200 lung nodules and by selecting the features with higher average scores from several supervised as well as unsupervised feature ranking algorithms. The signatures obtained from both the ranking approaches were integrated into two mathematical likelihood functions for tumor classification. Validation of the likelihood functions was performed on 265 public data sets of lung, colon, head and neck cancer with high classification rate. The achieved results show robustness of the models and suggest that diagnostic mathematical functions using general tumor phenotype can be successfully developed for cancer diagnosis.
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spelling pubmed-66030292019-07-14 Radiomics based likelihood functions for cancer diagnosis Shakir, Hina Deng, Yiming Rasheed, Haroon Khan, Tariq Mairaj Rasool Sci Rep Article Radiomic features based classifiers and neural networks have shown promising results in tumor classification. The classification performance can be further improved greatly by exploring and incorporating the discriminative features towards cancer into mathematical models. In this research work, we have developed two radiomics driven likelihood models in Computed Tomography(CT) images to classify lung, colon, head and neck cancer. Initially, two diagnostic radiomic signatures were derived by extracting 105 3-D features from 200 lung nodules and by selecting the features with higher average scores from several supervised as well as unsupervised feature ranking algorithms. The signatures obtained from both the ranking approaches were integrated into two mathematical likelihood functions for tumor classification. Validation of the likelihood functions was performed on 265 public data sets of lung, colon, head and neck cancer with high classification rate. The achieved results show robustness of the models and suggest that diagnostic mathematical functions using general tumor phenotype can be successfully developed for cancer diagnosis. Nature Publishing Group UK 2019-07-01 /pmc/articles/PMC6603029/ /pubmed/31263186 http://dx.doi.org/10.1038/s41598-019-45053-x Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Shakir, Hina
Deng, Yiming
Rasheed, Haroon
Khan, Tariq Mairaj Rasool
Radiomics based likelihood functions for cancer diagnosis
title Radiomics based likelihood functions for cancer diagnosis
title_full Radiomics based likelihood functions for cancer diagnosis
title_fullStr Radiomics based likelihood functions for cancer diagnosis
title_full_unstemmed Radiomics based likelihood functions for cancer diagnosis
title_short Radiomics based likelihood functions for cancer diagnosis
title_sort radiomics based likelihood functions for cancer diagnosis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6603029/
https://www.ncbi.nlm.nih.gov/pubmed/31263186
http://dx.doi.org/10.1038/s41598-019-45053-x
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