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Open(G)PIAS: An Open-Source Solution for the Construction of a High-Precision Acoustic Startle Response Setup for Tinnitus Screening and Threshold Estimation in Rodents

The modulation of the acoustic startle reflex (ASR) by a pre-stimulus called pre-pulse inhibition (PPI, for gap of silence pre-stimulus: GPIAS) is a versatile tool to, e.g., estimate hearing thresholds or identify subjective tinnitus percepts in rodents. A proper application of these paradigms depen...

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Autores principales: Gerum, Richard, Rahlfs, Hinrich, Streb, Matthias, Krauss, Patrick, Grimm, Jannik, Metzner, Claus, Tziridis, Konstantin, Günther, Michael, Schulze, Holger, Kellermann, Walter, Schilling, Achim
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6603242/
https://www.ncbi.nlm.nih.gov/pubmed/31293403
http://dx.doi.org/10.3389/fnbeh.2019.00140
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author Gerum, Richard
Rahlfs, Hinrich
Streb, Matthias
Krauss, Patrick
Grimm, Jannik
Metzner, Claus
Tziridis, Konstantin
Günther, Michael
Schulze, Holger
Kellermann, Walter
Schilling, Achim
author_facet Gerum, Richard
Rahlfs, Hinrich
Streb, Matthias
Krauss, Patrick
Grimm, Jannik
Metzner, Claus
Tziridis, Konstantin
Günther, Michael
Schulze, Holger
Kellermann, Walter
Schilling, Achim
author_sort Gerum, Richard
collection PubMed
description The modulation of the acoustic startle reflex (ASR) by a pre-stimulus called pre-pulse inhibition (PPI, for gap of silence pre-stimulus: GPIAS) is a versatile tool to, e.g., estimate hearing thresholds or identify subjective tinnitus percepts in rodents. A proper application of these paradigms depends on a reliable measurement of the ASR amplitudes and an exact stimulus presentation in terms of frequency and intensity. Here, we introduce a novel open-source solution for the construction of a low-cost ASR setup. The complete software for data acquisition and stimulus presentation is written in Python 3.6 and is provided as an Anaconda package. Furthermore, we provide a construction plan for the sensor system based on low-cost hardware components. Exemplary GPIAS data from two animal models (Mus musculus, Meriones unguiculatus) show that the ratio histograms (1-GPIAS) of the gap-pre-stimulus and no pre-stimulus ASR amplitudes can be well described by a log-normal distribution being in good accordance to previous studies with already established setups. Furthermore, it can be shown that the PPI as a function of pre-stimulus intensity (threshold paradigm) can be approximated with a hard-sigmoid function enabling a reproducible sensory threshold estimation. Thus, we show that the open-source solution could help to further establish the ASR method in many laboratories and, thus, facilitate and standardize research in animal models of tinnitus and/or hearing loss.
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spelling pubmed-66032422019-07-10 Open(G)PIAS: An Open-Source Solution for the Construction of a High-Precision Acoustic Startle Response Setup for Tinnitus Screening and Threshold Estimation in Rodents Gerum, Richard Rahlfs, Hinrich Streb, Matthias Krauss, Patrick Grimm, Jannik Metzner, Claus Tziridis, Konstantin Günther, Michael Schulze, Holger Kellermann, Walter Schilling, Achim Front Behav Neurosci Neuroscience The modulation of the acoustic startle reflex (ASR) by a pre-stimulus called pre-pulse inhibition (PPI, for gap of silence pre-stimulus: GPIAS) is a versatile tool to, e.g., estimate hearing thresholds or identify subjective tinnitus percepts in rodents. A proper application of these paradigms depends on a reliable measurement of the ASR amplitudes and an exact stimulus presentation in terms of frequency and intensity. Here, we introduce a novel open-source solution for the construction of a low-cost ASR setup. The complete software for data acquisition and stimulus presentation is written in Python 3.6 and is provided as an Anaconda package. Furthermore, we provide a construction plan for the sensor system based on low-cost hardware components. Exemplary GPIAS data from two animal models (Mus musculus, Meriones unguiculatus) show that the ratio histograms (1-GPIAS) of the gap-pre-stimulus and no pre-stimulus ASR amplitudes can be well described by a log-normal distribution being in good accordance to previous studies with already established setups. Furthermore, it can be shown that the PPI as a function of pre-stimulus intensity (threshold paradigm) can be approximated with a hard-sigmoid function enabling a reproducible sensory threshold estimation. Thus, we show that the open-source solution could help to further establish the ASR method in many laboratories and, thus, facilitate and standardize research in animal models of tinnitus and/or hearing loss. Frontiers Media S.A. 2019-06-25 /pmc/articles/PMC6603242/ /pubmed/31293403 http://dx.doi.org/10.3389/fnbeh.2019.00140 Text en Copyright © 2019 Gerum, Rahlfs, Streb, Krauss, Grimm, Metzner, Tziridis, Günther, Schulze, Kellermann and Schilling. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Gerum, Richard
Rahlfs, Hinrich
Streb, Matthias
Krauss, Patrick
Grimm, Jannik
Metzner, Claus
Tziridis, Konstantin
Günther, Michael
Schulze, Holger
Kellermann, Walter
Schilling, Achim
Open(G)PIAS: An Open-Source Solution for the Construction of a High-Precision Acoustic Startle Response Setup for Tinnitus Screening and Threshold Estimation in Rodents
title Open(G)PIAS: An Open-Source Solution for the Construction of a High-Precision Acoustic Startle Response Setup for Tinnitus Screening and Threshold Estimation in Rodents
title_full Open(G)PIAS: An Open-Source Solution for the Construction of a High-Precision Acoustic Startle Response Setup for Tinnitus Screening and Threshold Estimation in Rodents
title_fullStr Open(G)PIAS: An Open-Source Solution for the Construction of a High-Precision Acoustic Startle Response Setup for Tinnitus Screening and Threshold Estimation in Rodents
title_full_unstemmed Open(G)PIAS: An Open-Source Solution for the Construction of a High-Precision Acoustic Startle Response Setup for Tinnitus Screening and Threshold Estimation in Rodents
title_short Open(G)PIAS: An Open-Source Solution for the Construction of a High-Precision Acoustic Startle Response Setup for Tinnitus Screening and Threshold Estimation in Rodents
title_sort open(g)pias: an open-source solution for the construction of a high-precision acoustic startle response setup for tinnitus screening and threshold estimation in rodents
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6603242/
https://www.ncbi.nlm.nih.gov/pubmed/31293403
http://dx.doi.org/10.3389/fnbeh.2019.00140
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