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The three-legged stool of understanding metabolism: integrating metabolomics with biochemical genetics and computational modeling
Traditional biochemical research has resulted in a good understanding of many aspects of metabolism. However, this reductionist approach is time consuming and requires substantial resources, thus raising the question whether modern metabolomics and genomics should take over and replace the targeted...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AIMS Press
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6604926/ https://www.ncbi.nlm.nih.gov/pubmed/31294216 http://dx.doi.org/10.3934/microbiol.2018.2.289 |
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author | Downs, Diana M. Bazurto, Jannell V. Gupta, Anuj Fonseca, Luis L. Voit, Eberhard O. |
author_facet | Downs, Diana M. Bazurto, Jannell V. Gupta, Anuj Fonseca, Luis L. Voit, Eberhard O. |
author_sort | Downs, Diana M. |
collection | PubMed |
description | Traditional biochemical research has resulted in a good understanding of many aspects of metabolism. However, this reductionist approach is time consuming and requires substantial resources, thus raising the question whether modern metabolomics and genomics should take over and replace the targeted experiments of old. We proffer that such a replacement is neither feasible not desirable and propose instead the tight integration of modern, system-wide omics with traditional experimental bench science and dedicated computational approaches. This integration is an important prerequisite toward the optimal acquisition of knowledge regarding metabolism and physiology in health and disease. The commentary describes advantages and drawbacks of current approaches to assessing metabolism and highlights the challenges to be overcome as we strive to achieve a deeper level of metabolic understanding in the future. |
format | Online Article Text |
id | pubmed-6604926 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | AIMS Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-66049262019-07-10 The three-legged stool of understanding metabolism: integrating metabolomics with biochemical genetics and computational modeling Downs, Diana M. Bazurto, Jannell V. Gupta, Anuj Fonseca, Luis L. Voit, Eberhard O. AIMS Microbiol Commentary Traditional biochemical research has resulted in a good understanding of many aspects of metabolism. However, this reductionist approach is time consuming and requires substantial resources, thus raising the question whether modern metabolomics and genomics should take over and replace the targeted experiments of old. We proffer that such a replacement is neither feasible not desirable and propose instead the tight integration of modern, system-wide omics with traditional experimental bench science and dedicated computational approaches. This integration is an important prerequisite toward the optimal acquisition of knowledge regarding metabolism and physiology in health and disease. The commentary describes advantages and drawbacks of current approaches to assessing metabolism and highlights the challenges to be overcome as we strive to achieve a deeper level of metabolic understanding in the future. AIMS Press 2018-04-08 /pmc/articles/PMC6604926/ /pubmed/31294216 http://dx.doi.org/10.3934/microbiol.2018.2.289 Text en © 2018 the Author(s), licensee AIMS Press This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0) |
spellingShingle | Commentary Downs, Diana M. Bazurto, Jannell V. Gupta, Anuj Fonseca, Luis L. Voit, Eberhard O. The three-legged stool of understanding metabolism: integrating metabolomics with biochemical genetics and computational modeling |
title | The three-legged stool of understanding metabolism: integrating metabolomics with biochemical genetics and computational modeling |
title_full | The three-legged stool of understanding metabolism: integrating metabolomics with biochemical genetics and computational modeling |
title_fullStr | The three-legged stool of understanding metabolism: integrating metabolomics with biochemical genetics and computational modeling |
title_full_unstemmed | The three-legged stool of understanding metabolism: integrating metabolomics with biochemical genetics and computational modeling |
title_short | The three-legged stool of understanding metabolism: integrating metabolomics with biochemical genetics and computational modeling |
title_sort | three-legged stool of understanding metabolism: integrating metabolomics with biochemical genetics and computational modeling |
topic | Commentary |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6604926/ https://www.ncbi.nlm.nih.gov/pubmed/31294216 http://dx.doi.org/10.3934/microbiol.2018.2.289 |
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