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New models for human disease from the International Mouse Phenotyping Consortium
The International Mouse Phenotyping Consortium (IMPC) continues to expand the catalogue of mammalian gene function by conducting genome and phenome-wide phenotyping on knockout mouse lines. The extensive and standardized phenotype screens allow the identification of new potential models for human di...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer US
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6606664/ https://www.ncbi.nlm.nih.gov/pubmed/31127358 http://dx.doi.org/10.1007/s00335-019-09804-5 |
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author | Cacheiro, Pilar Haendel, Melissa A. Smedley, Damian |
author_facet | Cacheiro, Pilar Haendel, Melissa A. Smedley, Damian |
author_sort | Cacheiro, Pilar |
collection | PubMed |
description | The International Mouse Phenotyping Consortium (IMPC) continues to expand the catalogue of mammalian gene function by conducting genome and phenome-wide phenotyping on knockout mouse lines. The extensive and standardized phenotype screens allow the identification of new potential models for human disease through cross-species comparison by computing the similarity between the phenotypes observed in the mutant mice and the human phenotypes associated to their orthologous loci in Mendelian disease. Here, we present an update on the novel disease models available from the most recent data release (DR10.0), with 5861 mouse genes fully or partially phenotyped and a total number of 69,982 phenotype calls reported. With approximately one-third of human Mendelian genes with orthologous null mouse phenotypes described, the range of available models relevant for human diseases keeps increasing. Among the breadth of new data, we identify previously uncharacterized disease genes in the mouse and additional phenotypes for genes with existing mutant lines mimicking the associated disorder. The automated and unbiased discovery of relevant models for all types of rare diseases implemented by the IMPC constitutes a powerful tool for human genetics and precision medicine. |
format | Online Article Text |
id | pubmed-6606664 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-66066642019-07-18 New models for human disease from the International Mouse Phenotyping Consortium Cacheiro, Pilar Haendel, Melissa A. Smedley, Damian Mamm Genome Article The International Mouse Phenotyping Consortium (IMPC) continues to expand the catalogue of mammalian gene function by conducting genome and phenome-wide phenotyping on knockout mouse lines. The extensive and standardized phenotype screens allow the identification of new potential models for human disease through cross-species comparison by computing the similarity between the phenotypes observed in the mutant mice and the human phenotypes associated to their orthologous loci in Mendelian disease. Here, we present an update on the novel disease models available from the most recent data release (DR10.0), with 5861 mouse genes fully or partially phenotyped and a total number of 69,982 phenotype calls reported. With approximately one-third of human Mendelian genes with orthologous null mouse phenotypes described, the range of available models relevant for human diseases keeps increasing. Among the breadth of new data, we identify previously uncharacterized disease genes in the mouse and additional phenotypes for genes with existing mutant lines mimicking the associated disorder. The automated and unbiased discovery of relevant models for all types of rare diseases implemented by the IMPC constitutes a powerful tool for human genetics and precision medicine. Springer US 2019-05-24 2019 /pmc/articles/PMC6606664/ /pubmed/31127358 http://dx.doi.org/10.1007/s00335-019-09804-5 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Article Cacheiro, Pilar Haendel, Melissa A. Smedley, Damian New models for human disease from the International Mouse Phenotyping Consortium |
title | New models for human disease from the International Mouse Phenotyping Consortium |
title_full | New models for human disease from the International Mouse Phenotyping Consortium |
title_fullStr | New models for human disease from the International Mouse Phenotyping Consortium |
title_full_unstemmed | New models for human disease from the International Mouse Phenotyping Consortium |
title_short | New models for human disease from the International Mouse Phenotyping Consortium |
title_sort | new models for human disease from the international mouse phenotyping consortium |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6606664/ https://www.ncbi.nlm.nih.gov/pubmed/31127358 http://dx.doi.org/10.1007/s00335-019-09804-5 |
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