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New models for human disease from the International Mouse Phenotyping Consortium

The International Mouse Phenotyping Consortium (IMPC) continues to expand the catalogue of mammalian gene function by conducting genome and phenome-wide phenotyping on knockout mouse lines. The extensive and standardized phenotype screens allow the identification of new potential models for human di...

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Detalles Bibliográficos
Autores principales: Cacheiro, Pilar, Haendel, Melissa A., Smedley, Damian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6606664/
https://www.ncbi.nlm.nih.gov/pubmed/31127358
http://dx.doi.org/10.1007/s00335-019-09804-5
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author Cacheiro, Pilar
Haendel, Melissa A.
Smedley, Damian
author_facet Cacheiro, Pilar
Haendel, Melissa A.
Smedley, Damian
author_sort Cacheiro, Pilar
collection PubMed
description The International Mouse Phenotyping Consortium (IMPC) continues to expand the catalogue of mammalian gene function by conducting genome and phenome-wide phenotyping on knockout mouse lines. The extensive and standardized phenotype screens allow the identification of new potential models for human disease through cross-species comparison by computing the similarity between the phenotypes observed in the mutant mice and the human phenotypes associated to their orthologous loci in Mendelian disease. Here, we present an update on the novel disease models available from the most recent data release (DR10.0), with 5861 mouse genes fully or partially phenotyped and a total number of 69,982 phenotype calls reported. With approximately one-third of human Mendelian genes with orthologous null mouse phenotypes described, the range of available models relevant for human diseases keeps increasing. Among the breadth of new data, we identify previously uncharacterized disease genes in the mouse and additional phenotypes for genes with existing mutant lines mimicking the associated disorder. The automated and unbiased discovery of relevant models for all types of rare diseases implemented by the IMPC constitutes a powerful tool for human genetics and precision medicine.
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spelling pubmed-66066642019-07-18 New models for human disease from the International Mouse Phenotyping Consortium Cacheiro, Pilar Haendel, Melissa A. Smedley, Damian Mamm Genome Article The International Mouse Phenotyping Consortium (IMPC) continues to expand the catalogue of mammalian gene function by conducting genome and phenome-wide phenotyping on knockout mouse lines. The extensive and standardized phenotype screens allow the identification of new potential models for human disease through cross-species comparison by computing the similarity between the phenotypes observed in the mutant mice and the human phenotypes associated to their orthologous loci in Mendelian disease. Here, we present an update on the novel disease models available from the most recent data release (DR10.0), with 5861 mouse genes fully or partially phenotyped and a total number of 69,982 phenotype calls reported. With approximately one-third of human Mendelian genes with orthologous null mouse phenotypes described, the range of available models relevant for human diseases keeps increasing. Among the breadth of new data, we identify previously uncharacterized disease genes in the mouse and additional phenotypes for genes with existing mutant lines mimicking the associated disorder. The automated and unbiased discovery of relevant models for all types of rare diseases implemented by the IMPC constitutes a powerful tool for human genetics and precision medicine. Springer US 2019-05-24 2019 /pmc/articles/PMC6606664/ /pubmed/31127358 http://dx.doi.org/10.1007/s00335-019-09804-5 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Article
Cacheiro, Pilar
Haendel, Melissa A.
Smedley, Damian
New models for human disease from the International Mouse Phenotyping Consortium
title New models for human disease from the International Mouse Phenotyping Consortium
title_full New models for human disease from the International Mouse Phenotyping Consortium
title_fullStr New models for human disease from the International Mouse Phenotyping Consortium
title_full_unstemmed New models for human disease from the International Mouse Phenotyping Consortium
title_short New models for human disease from the International Mouse Phenotyping Consortium
title_sort new models for human disease from the international mouse phenotyping consortium
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6606664/
https://www.ncbi.nlm.nih.gov/pubmed/31127358
http://dx.doi.org/10.1007/s00335-019-09804-5
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