Cargando…

Protocol measuring horizontal gene transfer from algae to non-photosynthetic organisms

Horizontal gene transfer (HGT) is a natural process for an organism to transfer genetic material to another organism that is a completely different species, for example, from a blue-green alga to a non-photosynthetic bacterium. The phenomenon of HGT is not only of an interest to the science of molec...

Descripción completa

Detalles Bibliográficos
Autor principal: Lee, James Weifu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6607322/
https://www.ncbi.nlm.nih.gov/pubmed/31309043
http://dx.doi.org/10.1016/j.mex.2019.05.022
_version_ 1783432073425453056
author Lee, James Weifu
author_facet Lee, James Weifu
author_sort Lee, James Weifu
collection PubMed
description Horizontal gene transfer (HGT) is a natural process for an organism to transfer genetic material to another organism that is a completely different species, for example, from a blue-green alga to a non-photosynthetic bacterium. The phenomenon of HGT is not only of an interest to the science of molecular genetics and biology, but also to the biosafety issue of genetic engineering. The novel protocol reported here for the first time teaches how to measure HGT from a genetically engineered (GE) blue-green alga (gene donor) to wild-type E. coli (recipient). This novel protocol can be used to measure HGT frequency for both plasmid transgenes and/or genomic transgenes from a donor to recipient organism. • According to this novel protocol, the HGT frequency may be calculated from the number of HGT recipient colonies observed, the number of recipient cells plated, and the donor-recipient co-incubation time. • This approach can also help test the possible HGT routes to assess whether a HGT is through a direct cell-to-cell interaction or by an indirect cell-to-liquid environment-to-cell process. • The protocol may be applied in full and/or in part with adjustments to measure HGT for a wide range of donor and recipient organisms of interest.
format Online
Article
Text
id pubmed-6607322
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-66073222019-07-15 Protocol measuring horizontal gene transfer from algae to non-photosynthetic organisms Lee, James Weifu MethodsX Biochemistry, Genetics and Molecular Biology Horizontal gene transfer (HGT) is a natural process for an organism to transfer genetic material to another organism that is a completely different species, for example, from a blue-green alga to a non-photosynthetic bacterium. The phenomenon of HGT is not only of an interest to the science of molecular genetics and biology, but also to the biosafety issue of genetic engineering. The novel protocol reported here for the first time teaches how to measure HGT from a genetically engineered (GE) blue-green alga (gene donor) to wild-type E. coli (recipient). This novel protocol can be used to measure HGT frequency for both plasmid transgenes and/or genomic transgenes from a donor to recipient organism. • According to this novel protocol, the HGT frequency may be calculated from the number of HGT recipient colonies observed, the number of recipient cells plated, and the donor-recipient co-incubation time. • This approach can also help test the possible HGT routes to assess whether a HGT is through a direct cell-to-cell interaction or by an indirect cell-to-liquid environment-to-cell process. • The protocol may be applied in full and/or in part with adjustments to measure HGT for a wide range of donor and recipient organisms of interest. Elsevier 2019-06-25 /pmc/articles/PMC6607322/ /pubmed/31309043 http://dx.doi.org/10.1016/j.mex.2019.05.022 Text en http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Biochemistry, Genetics and Molecular Biology
Lee, James Weifu
Protocol measuring horizontal gene transfer from algae to non-photosynthetic organisms
title Protocol measuring horizontal gene transfer from algae to non-photosynthetic organisms
title_full Protocol measuring horizontal gene transfer from algae to non-photosynthetic organisms
title_fullStr Protocol measuring horizontal gene transfer from algae to non-photosynthetic organisms
title_full_unstemmed Protocol measuring horizontal gene transfer from algae to non-photosynthetic organisms
title_short Protocol measuring horizontal gene transfer from algae to non-photosynthetic organisms
title_sort protocol measuring horizontal gene transfer from algae to non-photosynthetic organisms
topic Biochemistry, Genetics and Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6607322/
https://www.ncbi.nlm.nih.gov/pubmed/31309043
http://dx.doi.org/10.1016/j.mex.2019.05.022
work_keys_str_mv AT leejamesweifu protocolmeasuringhorizontalgenetransferfromalgaetononphotosyntheticorganisms