Cargando…
Comprehensive analysis of differentially expressed long non-coding RNAs in non-small cell lung cancer
Non-small cell lung cancer (NSCLC) is the primary subtype of lung cancer. Long non-coding RNAs (lncRNAs) have been reported to serve prominent roles in cancer progression. However, the expression patterns and potential roles of lncRNAs in NSCLC remain to be elucidated. In the present study, four pub...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
D.A. Spandidos
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6607379/ https://www.ncbi.nlm.nih.gov/pubmed/31423174 http://dx.doi.org/10.3892/ol.2019.10414 |
_version_ | 1783432085776629760 |
---|---|
author | Zhou, Wenyong Liu, Tao Saren, Gaowa Liao, Li Fang, Wentao Zhao, Heng |
author_facet | Zhou, Wenyong Liu, Tao Saren, Gaowa Liao, Li Fang, Wentao Zhao, Heng |
author_sort | Zhou, Wenyong |
collection | PubMed |
description | Non-small cell lung cancer (NSCLC) is the primary subtype of lung cancer. Long non-coding RNAs (lncRNAs) have been reported to serve prominent roles in cancer progression. However, the expression patterns and potential roles of lncRNAs in NSCLC remain to be elucidated. In the present study, four public datasets were analyzed to identify differentially expressed lncRNAs (DElncs) in NSCLC. A further dataset, GSE19188, was analyzed to validate the findings. A total of 38 upregulated and 31 downregulated lncRNAs were identified in NSCLC, compared with samples from healthy controls. Among these, 12 lncRNAs were associated with the progression of NSCLC, and dysregulated between high grade (stage III and IV) and low grade (stage II) NSCLC samples. Moreover, dysregulation of lncRNA-SIGLEC17P, GGTA1P, A2M-AS1, LINC00938, GVINP1, LINC00667 and TMPO-AS1 was associated with overall survival time in patients with NSCLC. Co-expression analyses, combined with the construction of protein-protein interaction networks, were performed to reveal the potential roles of key lncRNAs in NSCLC. The present study revealed a series of lncRNAs involved in the progression of NSCLS, which may serve as novel biomarkers for the disease. |
format | Online Article Text |
id | pubmed-6607379 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | D.A. Spandidos |
record_format | MEDLINE/PubMed |
spelling | pubmed-66073792019-08-18 Comprehensive analysis of differentially expressed long non-coding RNAs in non-small cell lung cancer Zhou, Wenyong Liu, Tao Saren, Gaowa Liao, Li Fang, Wentao Zhao, Heng Oncol Lett Articles Non-small cell lung cancer (NSCLC) is the primary subtype of lung cancer. Long non-coding RNAs (lncRNAs) have been reported to serve prominent roles in cancer progression. However, the expression patterns and potential roles of lncRNAs in NSCLC remain to be elucidated. In the present study, four public datasets were analyzed to identify differentially expressed lncRNAs (DElncs) in NSCLC. A further dataset, GSE19188, was analyzed to validate the findings. A total of 38 upregulated and 31 downregulated lncRNAs were identified in NSCLC, compared with samples from healthy controls. Among these, 12 lncRNAs were associated with the progression of NSCLC, and dysregulated between high grade (stage III and IV) and low grade (stage II) NSCLC samples. Moreover, dysregulation of lncRNA-SIGLEC17P, GGTA1P, A2M-AS1, LINC00938, GVINP1, LINC00667 and TMPO-AS1 was associated with overall survival time in patients with NSCLC. Co-expression analyses, combined with the construction of protein-protein interaction networks, were performed to reveal the potential roles of key lncRNAs in NSCLC. The present study revealed a series of lncRNAs involved in the progression of NSCLS, which may serve as novel biomarkers for the disease. D.A. Spandidos 2019-08 2019-05-30 /pmc/articles/PMC6607379/ /pubmed/31423174 http://dx.doi.org/10.3892/ol.2019.10414 Text en Copyright: © Zhou et al. This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made. |
spellingShingle | Articles Zhou, Wenyong Liu, Tao Saren, Gaowa Liao, Li Fang, Wentao Zhao, Heng Comprehensive analysis of differentially expressed long non-coding RNAs in non-small cell lung cancer |
title | Comprehensive analysis of differentially expressed long non-coding RNAs in non-small cell lung cancer |
title_full | Comprehensive analysis of differentially expressed long non-coding RNAs in non-small cell lung cancer |
title_fullStr | Comprehensive analysis of differentially expressed long non-coding RNAs in non-small cell lung cancer |
title_full_unstemmed | Comprehensive analysis of differentially expressed long non-coding RNAs in non-small cell lung cancer |
title_short | Comprehensive analysis of differentially expressed long non-coding RNAs in non-small cell lung cancer |
title_sort | comprehensive analysis of differentially expressed long non-coding rnas in non-small cell lung cancer |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6607379/ https://www.ncbi.nlm.nih.gov/pubmed/31423174 http://dx.doi.org/10.3892/ol.2019.10414 |
work_keys_str_mv | AT zhouwenyong comprehensiveanalysisofdifferentiallyexpressedlongnoncodingrnasinnonsmallcelllungcancer AT liutao comprehensiveanalysisofdifferentiallyexpressedlongnoncodingrnasinnonsmallcelllungcancer AT sarengaowa comprehensiveanalysisofdifferentiallyexpressedlongnoncodingrnasinnonsmallcelllungcancer AT liaoli comprehensiveanalysisofdifferentiallyexpressedlongnoncodingrnasinnonsmallcelllungcancer AT fangwentao comprehensiveanalysisofdifferentiallyexpressedlongnoncodingrnasinnonsmallcelllungcancer AT zhaoheng comprehensiveanalysisofdifferentiallyexpressedlongnoncodingrnasinnonsmallcelllungcancer |