Cargando…

Comprehensive analysis of differentially expressed long non-coding RNAs in non-small cell lung cancer

Non-small cell lung cancer (NSCLC) is the primary subtype of lung cancer. Long non-coding RNAs (lncRNAs) have been reported to serve prominent roles in cancer progression. However, the expression patterns and potential roles of lncRNAs in NSCLC remain to be elucidated. In the present study, four pub...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhou, Wenyong, Liu, Tao, Saren, Gaowa, Liao, Li, Fang, Wentao, Zhao, Heng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: D.A. Spandidos 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6607379/
https://www.ncbi.nlm.nih.gov/pubmed/31423174
http://dx.doi.org/10.3892/ol.2019.10414
_version_ 1783432085776629760
author Zhou, Wenyong
Liu, Tao
Saren, Gaowa
Liao, Li
Fang, Wentao
Zhao, Heng
author_facet Zhou, Wenyong
Liu, Tao
Saren, Gaowa
Liao, Li
Fang, Wentao
Zhao, Heng
author_sort Zhou, Wenyong
collection PubMed
description Non-small cell lung cancer (NSCLC) is the primary subtype of lung cancer. Long non-coding RNAs (lncRNAs) have been reported to serve prominent roles in cancer progression. However, the expression patterns and potential roles of lncRNAs in NSCLC remain to be elucidated. In the present study, four public datasets were analyzed to identify differentially expressed lncRNAs (DElncs) in NSCLC. A further dataset, GSE19188, was analyzed to validate the findings. A total of 38 upregulated and 31 downregulated lncRNAs were identified in NSCLC, compared with samples from healthy controls. Among these, 12 lncRNAs were associated with the progression of NSCLC, and dysregulated between high grade (stage III and IV) and low grade (stage II) NSCLC samples. Moreover, dysregulation of lncRNA-SIGLEC17P, GGTA1P, A2M-AS1, LINC00938, GVINP1, LINC00667 and TMPO-AS1 was associated with overall survival time in patients with NSCLC. Co-expression analyses, combined with the construction of protein-protein interaction networks, were performed to reveal the potential roles of key lncRNAs in NSCLC. The present study revealed a series of lncRNAs involved in the progression of NSCLS, which may serve as novel biomarkers for the disease.
format Online
Article
Text
id pubmed-6607379
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher D.A. Spandidos
record_format MEDLINE/PubMed
spelling pubmed-66073792019-08-18 Comprehensive analysis of differentially expressed long non-coding RNAs in non-small cell lung cancer Zhou, Wenyong Liu, Tao Saren, Gaowa Liao, Li Fang, Wentao Zhao, Heng Oncol Lett Articles Non-small cell lung cancer (NSCLC) is the primary subtype of lung cancer. Long non-coding RNAs (lncRNAs) have been reported to serve prominent roles in cancer progression. However, the expression patterns and potential roles of lncRNAs in NSCLC remain to be elucidated. In the present study, four public datasets were analyzed to identify differentially expressed lncRNAs (DElncs) in NSCLC. A further dataset, GSE19188, was analyzed to validate the findings. A total of 38 upregulated and 31 downregulated lncRNAs were identified in NSCLC, compared with samples from healthy controls. Among these, 12 lncRNAs were associated with the progression of NSCLC, and dysregulated between high grade (stage III and IV) and low grade (stage II) NSCLC samples. Moreover, dysregulation of lncRNA-SIGLEC17P, GGTA1P, A2M-AS1, LINC00938, GVINP1, LINC00667 and TMPO-AS1 was associated with overall survival time in patients with NSCLC. Co-expression analyses, combined with the construction of protein-protein interaction networks, were performed to reveal the potential roles of key lncRNAs in NSCLC. The present study revealed a series of lncRNAs involved in the progression of NSCLS, which may serve as novel biomarkers for the disease. D.A. Spandidos 2019-08 2019-05-30 /pmc/articles/PMC6607379/ /pubmed/31423174 http://dx.doi.org/10.3892/ol.2019.10414 Text en Copyright: © Zhou et al. This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made.
spellingShingle Articles
Zhou, Wenyong
Liu, Tao
Saren, Gaowa
Liao, Li
Fang, Wentao
Zhao, Heng
Comprehensive analysis of differentially expressed long non-coding RNAs in non-small cell lung cancer
title Comprehensive analysis of differentially expressed long non-coding RNAs in non-small cell lung cancer
title_full Comprehensive analysis of differentially expressed long non-coding RNAs in non-small cell lung cancer
title_fullStr Comprehensive analysis of differentially expressed long non-coding RNAs in non-small cell lung cancer
title_full_unstemmed Comprehensive analysis of differentially expressed long non-coding RNAs in non-small cell lung cancer
title_short Comprehensive analysis of differentially expressed long non-coding RNAs in non-small cell lung cancer
title_sort comprehensive analysis of differentially expressed long non-coding rnas in non-small cell lung cancer
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6607379/
https://www.ncbi.nlm.nih.gov/pubmed/31423174
http://dx.doi.org/10.3892/ol.2019.10414
work_keys_str_mv AT zhouwenyong comprehensiveanalysisofdifferentiallyexpressedlongnoncodingrnasinnonsmallcelllungcancer
AT liutao comprehensiveanalysisofdifferentiallyexpressedlongnoncodingrnasinnonsmallcelllungcancer
AT sarengaowa comprehensiveanalysisofdifferentiallyexpressedlongnoncodingrnasinnonsmallcelllungcancer
AT liaoli comprehensiveanalysisofdifferentiallyexpressedlongnoncodingrnasinnonsmallcelllungcancer
AT fangwentao comprehensiveanalysisofdifferentiallyexpressedlongnoncodingrnasinnonsmallcelllungcancer
AT zhaoheng comprehensiveanalysisofdifferentiallyexpressedlongnoncodingrnasinnonsmallcelllungcancer