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Identification of microRNAs associated with the aggressiveness of prolactin pituitary tumors using bioinformatic analysis
Aggressive prolactin pituitary tumors, which exhibit aggressive behaviors and resistance to conventional treatments, are a huge challenge for neurosurgeons. Many studies have investigated the roles of microRNAs (miRNAs) in pituitary tumorigenesis, invasion and metastasis, but few have explored aggre...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
D.A. Spandidos
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6609352/ https://www.ncbi.nlm.nih.gov/pubmed/31173251 http://dx.doi.org/10.3892/or.2019.7173 |
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author | Wang, Zihao Gao, Lu Guo, Xiaopeng Feng, Chenzhe Deng, Kan Lian, Wei Xing, Bing |
author_facet | Wang, Zihao Gao, Lu Guo, Xiaopeng Feng, Chenzhe Deng, Kan Lian, Wei Xing, Bing |
author_sort | Wang, Zihao |
collection | PubMed |
description | Aggressive prolactin pituitary tumors, which exhibit aggressive behaviors and resistance to conventional treatments, are a huge challenge for neurosurgeons. Many studies have investigated the roles of microRNAs (miRNAs) in pituitary tumorigenesis, invasion and metastasis, but few have explored aggressiveness-associated miRNAs in aggressive pituitary tumors. Differentially expressed miRNAs (DEMs) between aggressive and nonaggressive prolactin pituitary tumors were screened using the GSE46294 miRNA expression profile downloaded from the GEO database. The potential target genes of the top three most highly upregulated and downregulated DEMs were predicted by miRTarBase, and potential functional annotation and pathway enrichment analysis were performed using the DAVID database. Protein-protein interaction (PPI) and miRNA-hub gene interaction networks were constructed by Cytoscape software. A total of 43 DEMs were identified, including 19 upregulated and 24 downregulated miRNAs, between aggressive and nonaggressive prolactin pituitary tumors. One hundred and seventy and 680 target genes were predicted for the top three most highly upregulated and downregulated miRNAs, respectively, and these genes were involved in functional enrichment pathways, such as regulation of transcription from RNA polymerase II promoter, DNA-templated transcription, Wnt signaling pathway, protein binding, and transcription factor activity (sequence-specific DNA binding). In the PPI network, the top 10 genes with the highest degree of connectivity of the upregulated and downregulated DEMs were selected as hub genes. By constructing an miRNA-hub gene network, it was found that most hub genes were potentially modulated by hsa-miR-489 and hsa-miR-520b. Targeting hsa-miR-489 and hsa-miR-520b may provide new clues for the diagnosis and treatment of aggressive prolactin pituitary tumors. |
format | Online Article Text |
id | pubmed-6609352 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | D.A. Spandidos |
record_format | MEDLINE/PubMed |
spelling | pubmed-66093522019-07-23 Identification of microRNAs associated with the aggressiveness of prolactin pituitary tumors using bioinformatic analysis Wang, Zihao Gao, Lu Guo, Xiaopeng Feng, Chenzhe Deng, Kan Lian, Wei Xing, Bing Oncol Rep Articles Aggressive prolactin pituitary tumors, which exhibit aggressive behaviors and resistance to conventional treatments, are a huge challenge for neurosurgeons. Many studies have investigated the roles of microRNAs (miRNAs) in pituitary tumorigenesis, invasion and metastasis, but few have explored aggressiveness-associated miRNAs in aggressive pituitary tumors. Differentially expressed miRNAs (DEMs) between aggressive and nonaggressive prolactin pituitary tumors were screened using the GSE46294 miRNA expression profile downloaded from the GEO database. The potential target genes of the top three most highly upregulated and downregulated DEMs were predicted by miRTarBase, and potential functional annotation and pathway enrichment analysis were performed using the DAVID database. Protein-protein interaction (PPI) and miRNA-hub gene interaction networks were constructed by Cytoscape software. A total of 43 DEMs were identified, including 19 upregulated and 24 downregulated miRNAs, between aggressive and nonaggressive prolactin pituitary tumors. One hundred and seventy and 680 target genes were predicted for the top three most highly upregulated and downregulated miRNAs, respectively, and these genes were involved in functional enrichment pathways, such as regulation of transcription from RNA polymerase II promoter, DNA-templated transcription, Wnt signaling pathway, protein binding, and transcription factor activity (sequence-specific DNA binding). In the PPI network, the top 10 genes with the highest degree of connectivity of the upregulated and downregulated DEMs were selected as hub genes. By constructing an miRNA-hub gene network, it was found that most hub genes were potentially modulated by hsa-miR-489 and hsa-miR-520b. Targeting hsa-miR-489 and hsa-miR-520b may provide new clues for the diagnosis and treatment of aggressive prolactin pituitary tumors. D.A. Spandidos 2019-08 2019-05-28 /pmc/articles/PMC6609352/ /pubmed/31173251 http://dx.doi.org/10.3892/or.2019.7173 Text en Copyright: © Wang et al. This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made. |
spellingShingle | Articles Wang, Zihao Gao, Lu Guo, Xiaopeng Feng, Chenzhe Deng, Kan Lian, Wei Xing, Bing Identification of microRNAs associated with the aggressiveness of prolactin pituitary tumors using bioinformatic analysis |
title | Identification of microRNAs associated with the aggressiveness of prolactin pituitary tumors using bioinformatic analysis |
title_full | Identification of microRNAs associated with the aggressiveness of prolactin pituitary tumors using bioinformatic analysis |
title_fullStr | Identification of microRNAs associated with the aggressiveness of prolactin pituitary tumors using bioinformatic analysis |
title_full_unstemmed | Identification of microRNAs associated with the aggressiveness of prolactin pituitary tumors using bioinformatic analysis |
title_short | Identification of microRNAs associated with the aggressiveness of prolactin pituitary tumors using bioinformatic analysis |
title_sort | identification of micrornas associated with the aggressiveness of prolactin pituitary tumors using bioinformatic analysis |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6609352/ https://www.ncbi.nlm.nih.gov/pubmed/31173251 http://dx.doi.org/10.3892/or.2019.7173 |
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