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Changes in the composition and function of bacterial communities during vermicomposting may explain beneficial properties of vermicompost

Vermicomposting is the process by which organic waste is broken down through the synergistic actions of earthworms and microbial communities. Although vermicomposting has been shown to effectively reduce organic biomass and generate high-quality fertilizer for plants, little is known about the bacte...

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Autores principales: Domínguez, Jorge, Aira, Manuel, Kolbe, Allison R., Gómez-Brandón, María, Pérez-Losada, Marcos
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6609614/
https://www.ncbi.nlm.nih.gov/pubmed/31273255
http://dx.doi.org/10.1038/s41598-019-46018-w
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author Domínguez, Jorge
Aira, Manuel
Kolbe, Allison R.
Gómez-Brandón, María
Pérez-Losada, Marcos
author_facet Domínguez, Jorge
Aira, Manuel
Kolbe, Allison R.
Gómez-Brandón, María
Pérez-Losada, Marcos
author_sort Domínguez, Jorge
collection PubMed
description Vermicomposting is the process by which organic waste is broken down through the synergistic actions of earthworms and microbial communities. Although vermicomposting has been shown to effectively reduce organic biomass and generate high-quality fertilizer for plants, little is known about the bacterial communities that are involved in this decomposition process. Since optimization of vermicomposting for commercial use necessitates additional knowledge of the underlying biological processes, this study sought to characterize the bacterial succession involved in the vermicomposting of Scotch broom (Cytisus scoparius), a leguminous shrub that has become invasive around the world with consequences for the dynamics and productivity of the ecosystems they occupy. Scotch broom was processed in a pilot-scale vermireactor for 91 days with the earthworm species Eisenia andrei. Samples were taken at the initiation of vermicomposting, and days 14, 42 and 91, representing both active and mature stages of vermicomposting. Significant changes (P < 0.0001) in the bacterial community composition (richness and evenness) were observed throughout the process. Increases in taxonomic diversity were accompanied by increases in functional diversity of the bacterial community, including metabolic capacity, streptomycin and salicylic acid synthesis, and nitrification. These results highlight the role of bacterial succession during the vermicomposting process and provide evidence of microbial functions that may explain the beneficial effects of vermicompost on soil and plants.
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spelling pubmed-66096142019-07-14 Changes in the composition and function of bacterial communities during vermicomposting may explain beneficial properties of vermicompost Domínguez, Jorge Aira, Manuel Kolbe, Allison R. Gómez-Brandón, María Pérez-Losada, Marcos Sci Rep Article Vermicomposting is the process by which organic waste is broken down through the synergistic actions of earthworms and microbial communities. Although vermicomposting has been shown to effectively reduce organic biomass and generate high-quality fertilizer for plants, little is known about the bacterial communities that are involved in this decomposition process. Since optimization of vermicomposting for commercial use necessitates additional knowledge of the underlying biological processes, this study sought to characterize the bacterial succession involved in the vermicomposting of Scotch broom (Cytisus scoparius), a leguminous shrub that has become invasive around the world with consequences for the dynamics and productivity of the ecosystems they occupy. Scotch broom was processed in a pilot-scale vermireactor for 91 days with the earthworm species Eisenia andrei. Samples were taken at the initiation of vermicomposting, and days 14, 42 and 91, representing both active and mature stages of vermicomposting. Significant changes (P < 0.0001) in the bacterial community composition (richness and evenness) were observed throughout the process. Increases in taxonomic diversity were accompanied by increases in functional diversity of the bacterial community, including metabolic capacity, streptomycin and salicylic acid synthesis, and nitrification. These results highlight the role of bacterial succession during the vermicomposting process and provide evidence of microbial functions that may explain the beneficial effects of vermicompost on soil and plants. Nature Publishing Group UK 2019-07-04 /pmc/articles/PMC6609614/ /pubmed/31273255 http://dx.doi.org/10.1038/s41598-019-46018-w Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Domínguez, Jorge
Aira, Manuel
Kolbe, Allison R.
Gómez-Brandón, María
Pérez-Losada, Marcos
Changes in the composition and function of bacterial communities during vermicomposting may explain beneficial properties of vermicompost
title Changes in the composition and function of bacterial communities during vermicomposting may explain beneficial properties of vermicompost
title_full Changes in the composition and function of bacterial communities during vermicomposting may explain beneficial properties of vermicompost
title_fullStr Changes in the composition and function of bacterial communities during vermicomposting may explain beneficial properties of vermicompost
title_full_unstemmed Changes in the composition and function of bacterial communities during vermicomposting may explain beneficial properties of vermicompost
title_short Changes in the composition and function of bacterial communities during vermicomposting may explain beneficial properties of vermicompost
title_sort changes in the composition and function of bacterial communities during vermicomposting may explain beneficial properties of vermicompost
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6609614/
https://www.ncbi.nlm.nih.gov/pubmed/31273255
http://dx.doi.org/10.1038/s41598-019-46018-w
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