Cargando…
Extensive sampling and high-throughput sequencing reveal Posidoniomycesatricolor gen. et sp. nov. (Aigialaceae, Pleosporales) as the dominant root mycobiont of the dominant Mediterranean seagrass Posidoniaoceanica
Abstract. Seagrasses provide invaluable ecosystem services yet very little is known about their root mycobiont diversity and distribution. Here we focused on the dominant Mediterranean seagrass Posidoniaoceanica and assessed its root mycobiome at 32 localities covering most of the ecoregions in the...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Pensoft Publishers
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6609996/ https://www.ncbi.nlm.nih.gov/pubmed/31303813 http://dx.doi.org/10.3897/mycokeys.55.35682 |
_version_ | 1783432422037127168 |
---|---|
author | Vohník, Martin Borovec, Ondřej Kolaříková, Zuzana Sudová, Radka Réblová, Martina |
author_facet | Vohník, Martin Borovec, Ondřej Kolaříková, Zuzana Sudová, Radka Réblová, Martina |
author_sort | Vohník, Martin |
collection | PubMed |
description | Abstract. Seagrasses provide invaluable ecosystem services yet very little is known about their root mycobiont diversity and distribution. Here we focused on the dominant Mediterranean seagrass Posidoniaoceanica and assessed its root mycobiome at 32 localities covering most of the ecoregions in the NW Mediterranean Sea using light and scanning electron microscopy and tag-encoded 454-pyrosequencing. Microscopy revealed that the recently discovered dark septate endophytic association specific for P.oceanica is present at all localities and pyrosequencing confirmed that the P.oceanica root mycobiome is dominated by a single undescribed pleosporalean fungus, hitherto unknown from other hosts and ecosystems. Its numerous slow-growing isolates were obtained from surface-sterilised root segments at one locality and after prolonged cultivation, several of them produced viable sterile mycelium. To infer their phylogenetic relationships we sequenced and analysed the large (LSU) and small (SSU) subunit nrDNA, the ITS nrDNA and the DNA-directed RNA polymerase II (RPB2). The fungus represents an independent marine biotrophic lineage in the Aigialaceae (Pleosporales) and is introduced here as Posidoniomycesatricolorgen. et sp. nov. Its closest relatives are typically plant-associated saprobes from marine, terrestrial and freshwater habitats in Southeast Asia and Central America. This study expands our knowledge and diversity of the Aigialaceae, adds a new symbiotic lifestyle to this family and provides a formal name for the dominant root mycobiont of the dominant Mediterranean seagrass. |
format | Online Article Text |
id | pubmed-6609996 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Pensoft Publishers |
record_format | MEDLINE/PubMed |
spelling | pubmed-66099962019-07-14 Extensive sampling and high-throughput sequencing reveal Posidoniomycesatricolor gen. et sp. nov. (Aigialaceae, Pleosporales) as the dominant root mycobiont of the dominant Mediterranean seagrass Posidoniaoceanica Vohník, Martin Borovec, Ondřej Kolaříková, Zuzana Sudová, Radka Réblová, Martina MycoKeys Research Article Abstract. Seagrasses provide invaluable ecosystem services yet very little is known about their root mycobiont diversity and distribution. Here we focused on the dominant Mediterranean seagrass Posidoniaoceanica and assessed its root mycobiome at 32 localities covering most of the ecoregions in the NW Mediterranean Sea using light and scanning electron microscopy and tag-encoded 454-pyrosequencing. Microscopy revealed that the recently discovered dark septate endophytic association specific for P.oceanica is present at all localities and pyrosequencing confirmed that the P.oceanica root mycobiome is dominated by a single undescribed pleosporalean fungus, hitherto unknown from other hosts and ecosystems. Its numerous slow-growing isolates were obtained from surface-sterilised root segments at one locality and after prolonged cultivation, several of them produced viable sterile mycelium. To infer their phylogenetic relationships we sequenced and analysed the large (LSU) and small (SSU) subunit nrDNA, the ITS nrDNA and the DNA-directed RNA polymerase II (RPB2). The fungus represents an independent marine biotrophic lineage in the Aigialaceae (Pleosporales) and is introduced here as Posidoniomycesatricolorgen. et sp. nov. Its closest relatives are typically plant-associated saprobes from marine, terrestrial and freshwater habitats in Southeast Asia and Central America. This study expands our knowledge and diversity of the Aigialaceae, adds a new symbiotic lifestyle to this family and provides a formal name for the dominant root mycobiont of the dominant Mediterranean seagrass. Pensoft Publishers 2019-06-26 /pmc/articles/PMC6609996/ /pubmed/31303813 http://dx.doi.org/10.3897/mycokeys.55.35682 Text en Martin Vohník, Ondřej Borovec, Zuzana Kolaříková, Radka Sudová, Martina Réblová http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Vohník, Martin Borovec, Ondřej Kolaříková, Zuzana Sudová, Radka Réblová, Martina Extensive sampling and high-throughput sequencing reveal Posidoniomycesatricolor gen. et sp. nov. (Aigialaceae, Pleosporales) as the dominant root mycobiont of the dominant Mediterranean seagrass Posidoniaoceanica |
title | Extensive sampling and high-throughput sequencing reveal Posidoniomycesatricolor gen. et sp. nov. (Aigialaceae, Pleosporales) as the dominant root mycobiont of the dominant Mediterranean seagrass Posidoniaoceanica |
title_full | Extensive sampling and high-throughput sequencing reveal Posidoniomycesatricolor gen. et sp. nov. (Aigialaceae, Pleosporales) as the dominant root mycobiont of the dominant Mediterranean seagrass Posidoniaoceanica |
title_fullStr | Extensive sampling and high-throughput sequencing reveal Posidoniomycesatricolor gen. et sp. nov. (Aigialaceae, Pleosporales) as the dominant root mycobiont of the dominant Mediterranean seagrass Posidoniaoceanica |
title_full_unstemmed | Extensive sampling and high-throughput sequencing reveal Posidoniomycesatricolor gen. et sp. nov. (Aigialaceae, Pleosporales) as the dominant root mycobiont of the dominant Mediterranean seagrass Posidoniaoceanica |
title_short | Extensive sampling and high-throughput sequencing reveal Posidoniomycesatricolor gen. et sp. nov. (Aigialaceae, Pleosporales) as the dominant root mycobiont of the dominant Mediterranean seagrass Posidoniaoceanica |
title_sort | extensive sampling and high-throughput sequencing reveal posidoniomycesatricolor gen. et sp. nov. (aigialaceae, pleosporales) as the dominant root mycobiont of the dominant mediterranean seagrass posidoniaoceanica |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6609996/ https://www.ncbi.nlm.nih.gov/pubmed/31303813 http://dx.doi.org/10.3897/mycokeys.55.35682 |
work_keys_str_mv | AT vohnikmartin extensivesamplingandhighthroughputsequencingrevealposidoniomycesatricolorgenetspnovaigialaceaepleosporalesasthedominantrootmycobiontofthedominantmediterraneanseagrassposidoniaoceanica AT borovecondrej extensivesamplingandhighthroughputsequencingrevealposidoniomycesatricolorgenetspnovaigialaceaepleosporalesasthedominantrootmycobiontofthedominantmediterraneanseagrassposidoniaoceanica AT kolarikovazuzana extensivesamplingandhighthroughputsequencingrevealposidoniomycesatricolorgenetspnovaigialaceaepleosporalesasthedominantrootmycobiontofthedominantmediterraneanseagrassposidoniaoceanica AT sudovaradka extensivesamplingandhighthroughputsequencingrevealposidoniomycesatricolorgenetspnovaigialaceaepleosporalesasthedominantrootmycobiontofthedominantmediterraneanseagrassposidoniaoceanica AT reblovamartina extensivesamplingandhighthroughputsequencingrevealposidoniomycesatricolorgenetspnovaigialaceaepleosporalesasthedominantrootmycobiontofthedominantmediterraneanseagrassposidoniaoceanica |