Cargando…

Utilising network pharmacology to explore the underlying mechanism of Wumei Pill in treating pancreatic neoplasms

BACKGROUND: Wumei Pill (WMP), a famous herbal formula, has been widely used to treat digestive system diseases in clinical practice in China for centuries. We have found a correlation between the indications of WMP and the typical symptoms of pancreatic neoplasms. However, the pharmacological mechan...

Descripción completa

Detalles Bibliográficos
Autores principales: Wan, Yuxiang, Xu, Lin, Liu, Zeyu, Yang, Ming, Jiang, Xin, Zhang, Qiaoli, Huang, Jinchang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6611005/
https://www.ncbi.nlm.nih.gov/pubmed/31272505
http://dx.doi.org/10.1186/s12906-019-2580-y
_version_ 1783432610375008256
author Wan, Yuxiang
Xu, Lin
Liu, Zeyu
Yang, Ming
Jiang, Xin
Zhang, Qiaoli
Huang, Jinchang
author_facet Wan, Yuxiang
Xu, Lin
Liu, Zeyu
Yang, Ming
Jiang, Xin
Zhang, Qiaoli
Huang, Jinchang
author_sort Wan, Yuxiang
collection PubMed
description BACKGROUND: Wumei Pill (WMP), a famous herbal formula, has been widely used to treat digestive system diseases in clinical practice in China for centuries. We have found a correlation between the indications of WMP and the typical symptoms of pancreatic neoplasms. However, the pharmacological mechanisms of WMP still remain unknown. METHODS: In the present work, we used a network pharmacological method to predict its underlying complex mechanism of treating pancreatic neoplasms. Firstly, we obtained relative compounds of WMP based on TCMSP database, TCM database@Taiwan and TCMID database and collected potential targets of these compounds by target fishing. Then we built the pancreatic neoplasms target database by CTD, TTD, PharmGKB. Based on the matching results between WMP potential targets and pancreatic neoplasms targets, we built a PPI network to analyze the interactions among these targets and screen the hub targets by topology. Furthermore, DAVID bioinformatics resources were utilized for the enrichment analysis on GO_BP and KEGG. RESULTS: A total of 80 active ingredients and 77 targets of WMP were picked out. The results of DAVID enrichment analysis indicated that 58 cellular biological processes (FDR < 0.01) and 17 pathways (FDR < 0.01) of WMP mostly participated in the complex treating effects associated with proliferation, apoptosis, inflammatory response and angiogenesis. Moreover, 17 hub nodes of WMP (PTGS2, BCL2, TP53, IL6, MAPK1, EGFR, EGF, CASP3, JUN, MAPK8, MMP9, VEGFA, TNF, MYC, AKT1, FOS and TGFB1) were recognized as potential targets of treatments, implying the underlying mechanisms of WMP acting on pancreatic neoplasms. CONCLUSION: WMP could alleviate the symptoms of pancreatic neoplasms through the molecular mechanisms predicted by network pharmacology. This study proposes a strategy to elucidate the mechanisms of Traditional Chinese Medicine (TCM) at the level of network pharmacology. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12906-019-2580-y) contains supplementary material, which is available to authorized users.
format Online
Article
Text
id pubmed-6611005
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-66110052019-07-16 Utilising network pharmacology to explore the underlying mechanism of Wumei Pill in treating pancreatic neoplasms Wan, Yuxiang Xu, Lin Liu, Zeyu Yang, Ming Jiang, Xin Zhang, Qiaoli Huang, Jinchang BMC Complement Altern Med Research Article BACKGROUND: Wumei Pill (WMP), a famous herbal formula, has been widely used to treat digestive system diseases in clinical practice in China for centuries. We have found a correlation between the indications of WMP and the typical symptoms of pancreatic neoplasms. However, the pharmacological mechanisms of WMP still remain unknown. METHODS: In the present work, we used a network pharmacological method to predict its underlying complex mechanism of treating pancreatic neoplasms. Firstly, we obtained relative compounds of WMP based on TCMSP database, TCM database@Taiwan and TCMID database and collected potential targets of these compounds by target fishing. Then we built the pancreatic neoplasms target database by CTD, TTD, PharmGKB. Based on the matching results between WMP potential targets and pancreatic neoplasms targets, we built a PPI network to analyze the interactions among these targets and screen the hub targets by topology. Furthermore, DAVID bioinformatics resources were utilized for the enrichment analysis on GO_BP and KEGG. RESULTS: A total of 80 active ingredients and 77 targets of WMP were picked out. The results of DAVID enrichment analysis indicated that 58 cellular biological processes (FDR < 0.01) and 17 pathways (FDR < 0.01) of WMP mostly participated in the complex treating effects associated with proliferation, apoptosis, inflammatory response and angiogenesis. Moreover, 17 hub nodes of WMP (PTGS2, BCL2, TP53, IL6, MAPK1, EGFR, EGF, CASP3, JUN, MAPK8, MMP9, VEGFA, TNF, MYC, AKT1, FOS and TGFB1) were recognized as potential targets of treatments, implying the underlying mechanisms of WMP acting on pancreatic neoplasms. CONCLUSION: WMP could alleviate the symptoms of pancreatic neoplasms through the molecular mechanisms predicted by network pharmacology. This study proposes a strategy to elucidate the mechanisms of Traditional Chinese Medicine (TCM) at the level of network pharmacology. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12906-019-2580-y) contains supplementary material, which is available to authorized users. BioMed Central 2019-07-04 /pmc/articles/PMC6611005/ /pubmed/31272505 http://dx.doi.org/10.1186/s12906-019-2580-y Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Wan, Yuxiang
Xu, Lin
Liu, Zeyu
Yang, Ming
Jiang, Xin
Zhang, Qiaoli
Huang, Jinchang
Utilising network pharmacology to explore the underlying mechanism of Wumei Pill in treating pancreatic neoplasms
title Utilising network pharmacology to explore the underlying mechanism of Wumei Pill in treating pancreatic neoplasms
title_full Utilising network pharmacology to explore the underlying mechanism of Wumei Pill in treating pancreatic neoplasms
title_fullStr Utilising network pharmacology to explore the underlying mechanism of Wumei Pill in treating pancreatic neoplasms
title_full_unstemmed Utilising network pharmacology to explore the underlying mechanism of Wumei Pill in treating pancreatic neoplasms
title_short Utilising network pharmacology to explore the underlying mechanism of Wumei Pill in treating pancreatic neoplasms
title_sort utilising network pharmacology to explore the underlying mechanism of wumei pill in treating pancreatic neoplasms
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6611005/
https://www.ncbi.nlm.nih.gov/pubmed/31272505
http://dx.doi.org/10.1186/s12906-019-2580-y
work_keys_str_mv AT wanyuxiang utilisingnetworkpharmacologytoexploretheunderlyingmechanismofwumeipillintreatingpancreaticneoplasms
AT xulin utilisingnetworkpharmacologytoexploretheunderlyingmechanismofwumeipillintreatingpancreaticneoplasms
AT liuzeyu utilisingnetworkpharmacologytoexploretheunderlyingmechanismofwumeipillintreatingpancreaticneoplasms
AT yangming utilisingnetworkpharmacologytoexploretheunderlyingmechanismofwumeipillintreatingpancreaticneoplasms
AT jiangxin utilisingnetworkpharmacologytoexploretheunderlyingmechanismofwumeipillintreatingpancreaticneoplasms
AT zhangqiaoli utilisingnetworkpharmacologytoexploretheunderlyingmechanismofwumeipillintreatingpancreaticneoplasms
AT huangjinchang utilisingnetworkpharmacologytoexploretheunderlyingmechanismofwumeipillintreatingpancreaticneoplasms