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Ancrocorticia populi gen. nov., sp. nov, isolated from the symptomatic bark of Populus × euramericana canker
A Gram‐staining positive facultative anaerobic, non‐motile strain, sk1b4(T), was isolated from canker of symptomatic bark tissue of a Populus × euramericana. 16S rRNA gene sequence analyses showed that strain sk1b4(T) shared the highest similarity with Arcanobacterium phocisimile (94.1%). Within the...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6612551/ https://www.ncbi.nlm.nih.gov/pubmed/30656854 http://dx.doi.org/10.1002/mbo3.792 |
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author | Xu, Guan‐tang Xue, Han Piao, Chun‐gen Guo, Min‐wei Li, Yong |
author_facet | Xu, Guan‐tang Xue, Han Piao, Chun‐gen Guo, Min‐wei Li, Yong |
author_sort | Xu, Guan‐tang |
collection | PubMed |
description | A Gram‐staining positive facultative anaerobic, non‐motile strain, sk1b4(T), was isolated from canker of symptomatic bark tissue of a Populus × euramericana. 16S rRNA gene sequence analyses showed that strain sk1b4(T) shared the highest similarity with Arcanobacterium phocisimile (94.1%). Within the phylogenetic tree, the novel isolate formed a distinct branch from Actinobaculum, Arcanobacterium, and Trueperella. The percentage of conserved proteins calculated from genomic sequence indicated a low level of relatedness between the novel strain and its phylogenetic neighbors. Growth of the novel strain occurred at temperatures between 10 and 41°C, and within a pH range of 6.0–9.0; optimal growth occurred at 30°C and at pH 6.0–9.0. Growth also occurred within a NaCl concentration of 1%–5% (w/v). The major fatty acids of the strain were C(14:0), C(16:0), and C(18:1 ) ω9c (, )and major polar lipids were glycolipid, phosphatidylinositol mannoside, phospholipid, diphosphatidylglycerol, and phosphatidylglycerol. Respiratory quinone was absent. On the basis of phenotypic and genotypic characteristics, we propose that the novel isolate should be classified as a novel species in a new genus: Ancrocorticia populi gen. nov., sp. nov. The type strain is sk1b4(T) (=CFCC 14564(T)= KCTC 39919(T)). |
format | Online Article Text |
id | pubmed-6612551 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-66125512019-07-16 Ancrocorticia populi gen. nov., sp. nov, isolated from the symptomatic bark of Populus × euramericana canker Xu, Guan‐tang Xue, Han Piao, Chun‐gen Guo, Min‐wei Li, Yong Microbiologyopen Original Articles A Gram‐staining positive facultative anaerobic, non‐motile strain, sk1b4(T), was isolated from canker of symptomatic bark tissue of a Populus × euramericana. 16S rRNA gene sequence analyses showed that strain sk1b4(T) shared the highest similarity with Arcanobacterium phocisimile (94.1%). Within the phylogenetic tree, the novel isolate formed a distinct branch from Actinobaculum, Arcanobacterium, and Trueperella. The percentage of conserved proteins calculated from genomic sequence indicated a low level of relatedness between the novel strain and its phylogenetic neighbors. Growth of the novel strain occurred at temperatures between 10 and 41°C, and within a pH range of 6.0–9.0; optimal growth occurred at 30°C and at pH 6.0–9.0. Growth also occurred within a NaCl concentration of 1%–5% (w/v). The major fatty acids of the strain were C(14:0), C(16:0), and C(18:1 ) ω9c (, )and major polar lipids were glycolipid, phosphatidylinositol mannoside, phospholipid, diphosphatidylglycerol, and phosphatidylglycerol. Respiratory quinone was absent. On the basis of phenotypic and genotypic characteristics, we propose that the novel isolate should be classified as a novel species in a new genus: Ancrocorticia populi gen. nov., sp. nov. The type strain is sk1b4(T) (=CFCC 14564(T)= KCTC 39919(T)). John Wiley and Sons Inc. 2019-01-17 /pmc/articles/PMC6612551/ /pubmed/30656854 http://dx.doi.org/10.1002/mbo3.792 Text en © 2019 The Authors. MicrobiologyOpen published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Xu, Guan‐tang Xue, Han Piao, Chun‐gen Guo, Min‐wei Li, Yong Ancrocorticia populi gen. nov., sp. nov, isolated from the symptomatic bark of Populus × euramericana canker |
title |
Ancrocorticia populi gen. nov., sp. nov, isolated from the symptomatic bark of Populus × euramericana canker |
title_full |
Ancrocorticia populi gen. nov., sp. nov, isolated from the symptomatic bark of Populus × euramericana canker |
title_fullStr |
Ancrocorticia populi gen. nov., sp. nov, isolated from the symptomatic bark of Populus × euramericana canker |
title_full_unstemmed |
Ancrocorticia populi gen. nov., sp. nov, isolated from the symptomatic bark of Populus × euramericana canker |
title_short |
Ancrocorticia populi gen. nov., sp. nov, isolated from the symptomatic bark of Populus × euramericana canker |
title_sort | ancrocorticia populi gen. nov., sp. nov, isolated from the symptomatic bark of populus × euramericana canker |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6612551/ https://www.ncbi.nlm.nih.gov/pubmed/30656854 http://dx.doi.org/10.1002/mbo3.792 |
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