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Ancrocorticia populi gen. nov., sp. nov, isolated from the symptomatic bark of Populus × euramericana canker

A Gram‐staining positive facultative anaerobic, non‐motile strain, sk1b4(T), was isolated from canker of symptomatic bark tissue of a Populus × euramericana. 16S rRNA gene sequence analyses showed that strain sk1b4(T) shared the highest similarity with Arcanobacterium phocisimile (94.1%). Within the...

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Autores principales: Xu, Guan‐tang, Xue, Han, Piao, Chun‐gen, Guo, Min‐wei, Li, Yong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6612551/
https://www.ncbi.nlm.nih.gov/pubmed/30656854
http://dx.doi.org/10.1002/mbo3.792
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author Xu, Guan‐tang
Xue, Han
Piao, Chun‐gen
Guo, Min‐wei
Li, Yong
author_facet Xu, Guan‐tang
Xue, Han
Piao, Chun‐gen
Guo, Min‐wei
Li, Yong
author_sort Xu, Guan‐tang
collection PubMed
description A Gram‐staining positive facultative anaerobic, non‐motile strain, sk1b4(T), was isolated from canker of symptomatic bark tissue of a Populus × euramericana. 16S rRNA gene sequence analyses showed that strain sk1b4(T) shared the highest similarity with Arcanobacterium phocisimile (94.1%). Within the phylogenetic tree, the novel isolate formed a distinct branch from Actinobaculum, Arcanobacterium, and Trueperella. The percentage of conserved proteins calculated from genomic sequence indicated a low level of relatedness between the novel strain and its phylogenetic neighbors. Growth of the novel strain occurred at temperatures between 10 and 41°C, and within a pH range of 6.0–9.0; optimal growth occurred at 30°C and at pH 6.0–9.0. Growth also occurred within a NaCl concentration of 1%–5% (w/v). The major fatty acids of the strain were C(14:0), C(16:0), and C(18:1 ) ω9c (, )and major polar lipids were glycolipid, phosphatidylinositol mannoside, phospholipid, diphosphatidylglycerol, and phosphatidylglycerol. Respiratory quinone was absent. On the basis of phenotypic and genotypic characteristics, we propose that the novel isolate should be classified as a novel species in a new genus: Ancrocorticia populi gen. nov., sp. nov. The type strain is sk1b4(T) (=CFCC 14564(T)= KCTC 39919(T)).
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spelling pubmed-66125512019-07-16 Ancrocorticia populi gen. nov., sp. nov, isolated from the symptomatic bark of Populus × euramericana canker Xu, Guan‐tang Xue, Han Piao, Chun‐gen Guo, Min‐wei Li, Yong Microbiologyopen Original Articles A Gram‐staining positive facultative anaerobic, non‐motile strain, sk1b4(T), was isolated from canker of symptomatic bark tissue of a Populus × euramericana. 16S rRNA gene sequence analyses showed that strain sk1b4(T) shared the highest similarity with Arcanobacterium phocisimile (94.1%). Within the phylogenetic tree, the novel isolate formed a distinct branch from Actinobaculum, Arcanobacterium, and Trueperella. The percentage of conserved proteins calculated from genomic sequence indicated a low level of relatedness between the novel strain and its phylogenetic neighbors. Growth of the novel strain occurred at temperatures between 10 and 41°C, and within a pH range of 6.0–9.0; optimal growth occurred at 30°C and at pH 6.0–9.0. Growth also occurred within a NaCl concentration of 1%–5% (w/v). The major fatty acids of the strain were C(14:0), C(16:0), and C(18:1 ) ω9c (, )and major polar lipids were glycolipid, phosphatidylinositol mannoside, phospholipid, diphosphatidylglycerol, and phosphatidylglycerol. Respiratory quinone was absent. On the basis of phenotypic and genotypic characteristics, we propose that the novel isolate should be classified as a novel species in a new genus: Ancrocorticia populi gen. nov., sp. nov. The type strain is sk1b4(T) (=CFCC 14564(T)= KCTC 39919(T)). John Wiley and Sons Inc. 2019-01-17 /pmc/articles/PMC6612551/ /pubmed/30656854 http://dx.doi.org/10.1002/mbo3.792 Text en © 2019 The Authors. MicrobiologyOpen published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Xu, Guan‐tang
Xue, Han
Piao, Chun‐gen
Guo, Min‐wei
Li, Yong
Ancrocorticia populi gen. nov., sp. nov, isolated from the symptomatic bark of Populus × euramericana canker
title Ancrocorticia populi gen. nov., sp. nov, isolated from the symptomatic bark of Populus × euramericana canker
title_full Ancrocorticia populi gen. nov., sp. nov, isolated from the symptomatic bark of Populus × euramericana canker
title_fullStr Ancrocorticia populi gen. nov., sp. nov, isolated from the symptomatic bark of Populus × euramericana canker
title_full_unstemmed Ancrocorticia populi gen. nov., sp. nov, isolated from the symptomatic bark of Populus × euramericana canker
title_short Ancrocorticia populi gen. nov., sp. nov, isolated from the symptomatic bark of Populus × euramericana canker
title_sort ancrocorticia populi gen. nov., sp. nov, isolated from the symptomatic bark of populus × euramericana canker
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6612551/
https://www.ncbi.nlm.nih.gov/pubmed/30656854
http://dx.doi.org/10.1002/mbo3.792
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