Cargando…

Data describing the effects of depletion of Myoparr, myogenin, Ddx17, and hnRNPK in differentiating C2C12 cells

Myoparr is a promoter-associated long non-coding RNA (lncRNA) that is expressed from the promoter region of myogenin gene. Myoparr is essential for the proper differentiation of skeletal muscle cells; it accomplishes this by activating the expression of myogenin and myogenic microRNAs (miRNAs). In t...

Descripción completa

Detalles Bibliográficos
Autores principales: Hitachi, Keisuke, Tsuchida, Kunihiro
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6612617/
https://www.ncbi.nlm.nih.gov/pubmed/31321265
http://dx.doi.org/10.1016/j.dib.2019.104172
_version_ 1783432902996918272
author Hitachi, Keisuke
Tsuchida, Kunihiro
author_facet Hitachi, Keisuke
Tsuchida, Kunihiro
author_sort Hitachi, Keisuke
collection PubMed
description Myoparr is a promoter-associated long non-coding RNA (lncRNA) that is expressed from the promoter region of myogenin gene. Myoparr is essential for the proper differentiation of skeletal muscle cells; it accomplishes this by activating the expression of myogenin and myogenic microRNAs (miRNAs). In this study, we provide the RNA-seq data describing the changes in gene expression induced by knockdown of Myoparr, myogenin, and two Myoparr-binding proteins (Ddx17 and hnRNPK) during skeletal muscle differentiation in C2C12 cells. Raw data files were deposited in Sequence Read Archive in DNA Data Bank of Japan (DDBJ) under the accession number DRA005527. These data are related to the research article “Myogenin promoter-associated lncRNA Myoparr is essential for myogenic differentiation” Hitachi et al., 2019.
format Online
Article
Text
id pubmed-6612617
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-66126172019-07-18 Data describing the effects of depletion of Myoparr, myogenin, Ddx17, and hnRNPK in differentiating C2C12 cells Hitachi, Keisuke Tsuchida, Kunihiro Data Brief Biochemistry, Genetics and Molecular Biology Myoparr is a promoter-associated long non-coding RNA (lncRNA) that is expressed from the promoter region of myogenin gene. Myoparr is essential for the proper differentiation of skeletal muscle cells; it accomplishes this by activating the expression of myogenin and myogenic microRNAs (miRNAs). In this study, we provide the RNA-seq data describing the changes in gene expression induced by knockdown of Myoparr, myogenin, and two Myoparr-binding proteins (Ddx17 and hnRNPK) during skeletal muscle differentiation in C2C12 cells. Raw data files were deposited in Sequence Read Archive in DNA Data Bank of Japan (DDBJ) under the accession number DRA005527. These data are related to the research article “Myogenin promoter-associated lncRNA Myoparr is essential for myogenic differentiation” Hitachi et al., 2019. Elsevier 2019-06-24 /pmc/articles/PMC6612617/ /pubmed/31321265 http://dx.doi.org/10.1016/j.dib.2019.104172 Text en © 2019 The Author(s) http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Biochemistry, Genetics and Molecular Biology
Hitachi, Keisuke
Tsuchida, Kunihiro
Data describing the effects of depletion of Myoparr, myogenin, Ddx17, and hnRNPK in differentiating C2C12 cells
title Data describing the effects of depletion of Myoparr, myogenin, Ddx17, and hnRNPK in differentiating C2C12 cells
title_full Data describing the effects of depletion of Myoparr, myogenin, Ddx17, and hnRNPK in differentiating C2C12 cells
title_fullStr Data describing the effects of depletion of Myoparr, myogenin, Ddx17, and hnRNPK in differentiating C2C12 cells
title_full_unstemmed Data describing the effects of depletion of Myoparr, myogenin, Ddx17, and hnRNPK in differentiating C2C12 cells
title_short Data describing the effects of depletion of Myoparr, myogenin, Ddx17, and hnRNPK in differentiating C2C12 cells
title_sort data describing the effects of depletion of myoparr, myogenin, ddx17, and hnrnpk in differentiating c2c12 cells
topic Biochemistry, Genetics and Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6612617/
https://www.ncbi.nlm.nih.gov/pubmed/31321265
http://dx.doi.org/10.1016/j.dib.2019.104172
work_keys_str_mv AT hitachikeisuke datadescribingtheeffectsofdepletionofmyoparrmyogeninddx17andhnrnpkindifferentiatingc2c12cells
AT tsuchidakunihiro datadescribingtheeffectsofdepletionofmyoparrmyogeninddx17andhnrnpkindifferentiatingc2c12cells