Cargando…
TideHunter: efficient and sensitive tandem repeat detection from noisy long-reads using seed-and-chain
MOTIVATION: Pacific Biosciences (PacBio) and Oxford Nanopore Technologies (ONT) sequencing technologies can produce long-reads up to tens of kilobases, but with high error rates. In order to reduce sequencing error, Rolling Circle Amplification (RCA) has been used to improve library preparation by a...
Autores principales: | Gao, Yan, Liu, Bo, Wang, Yadong, Xing, Yi |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6612900/ https://www.ncbi.nlm.nih.gov/pubmed/31510677 http://dx.doi.org/10.1093/bioinformatics/btz376 |
Ejemplares similares
-
cloudSPAdes: assembly of synthetic long reads using de Bruijn graphs
por: Tolstoganov, Ivan, et al.
Publicado: (2019) -
Integrating read-based and population-based phasing for dense and accurate haplotyping of individual genomes
por: Bansal, Vikas
Publicado: (2019) -
Minnow: a principled framework for rapid simulation of dscRNA-seq data at the read level
por: Sarkar, Hirak, et al.
Publicado: (2019) -
ADAPTIVE: leArning DAta-dePendenT, concIse molecular VEctors for fast, accurate metabolite identification from tandem mass spectra
por: Nguyen, Dai Hai, et al.
Publicado: (2019) -
Fully-sensitive seed finding in sequence graphs using a hybrid index
por: Ghaffaari, Ali, et al.
Publicado: (2019)