Cargando…
A pilot metabolomics study of tuberculosis immune reconstitution inflammatory syndrome
BACKGROUND: Diagnosis of paradoxical tuberculosis-associated immune reconstitution inflammatory syndrome (TB-IRIS) is challenging and new tools are needed for early diagnosis as well as to understand the biochemical events that underlie the pathology in TB-IRIS. METHODS: Plasma samples were obtained...
Autores principales: | , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6613934/ https://www.ncbi.nlm.nih.gov/pubmed/31009738 http://dx.doi.org/10.1016/j.ijid.2019.04.015 |
_version_ | 1783433105280860160 |
---|---|
author | Silva, Carlos A.M. Graham, Barbara Webb, Kristofor Ashton, Laura Vari Harton, Marisa Luetkemeyer, Annie F. Bokatzian, Samantha Almubarak, Reem Mahapatra, Sebabrata Hovind, Laura Kendall, Michelle A. Havlir, Diane Belisle, John T. De Groote, Mary Ann |
author_facet | Silva, Carlos A.M. Graham, Barbara Webb, Kristofor Ashton, Laura Vari Harton, Marisa Luetkemeyer, Annie F. Bokatzian, Samantha Almubarak, Reem Mahapatra, Sebabrata Hovind, Laura Kendall, Michelle A. Havlir, Diane Belisle, John T. De Groote, Mary Ann |
author_sort | Silva, Carlos A.M. |
collection | PubMed |
description | BACKGROUND: Diagnosis of paradoxical tuberculosis-associated immune reconstitution inflammatory syndrome (TB-IRIS) is challenging and new tools are needed for early diagnosis as well as to understand the biochemical events that underlie the pathology in TB-IRIS. METHODS: Plasma samples were obtained from participants from a randomized HIV/TB treatment strategy study (AIDS Clinical Trials Group [ACTG] A5221) with (n = 26) and without TB-IRIS (n = 22) for an untargeted metabolomics pilot study by liquid-chromatography mass spectrometry. The metabolic profile of these participants was compared at the study entry and as close to the diagnosis of TB-IRIS as possible (TB-IRIS window). Molecular features with p < 0.05 and log(2) fold change ≥0.58 were submitted for pathway analysis through MetaboAnalyst. We also elucidated potential metabolic signatures for TB-IRIS using a LASSO regression model. RESULTS: At the study entry, we showed that the arachidonic acid and glycerophospholipid metabolism were altered in the TB-IRIS group. Sphingolipid and linoleic acid metabolism were the most affected pathways during the TB-IRIS window. LASSO modeling selected a set of 8 and 7 molecular features with the potential to predict TB-IRIS at study entry and during the TB-IRIS window, respectively. CONCLUSION: This study suggests that the use of plasma metabolites may distinguish HIV-TB patients with and without TB-IRIS. |
format | Online Article Text |
id | pubmed-6613934 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
record_format | MEDLINE/PubMed |
spelling | pubmed-66139342019-07-08 A pilot metabolomics study of tuberculosis immune reconstitution inflammatory syndrome Silva, Carlos A.M. Graham, Barbara Webb, Kristofor Ashton, Laura Vari Harton, Marisa Luetkemeyer, Annie F. Bokatzian, Samantha Almubarak, Reem Mahapatra, Sebabrata Hovind, Laura Kendall, Michelle A. Havlir, Diane Belisle, John T. De Groote, Mary Ann Int J Infect Dis Article BACKGROUND: Diagnosis of paradoxical tuberculosis-associated immune reconstitution inflammatory syndrome (TB-IRIS) is challenging and new tools are needed for early diagnosis as well as to understand the biochemical events that underlie the pathology in TB-IRIS. METHODS: Plasma samples were obtained from participants from a randomized HIV/TB treatment strategy study (AIDS Clinical Trials Group [ACTG] A5221) with (n = 26) and without TB-IRIS (n = 22) for an untargeted metabolomics pilot study by liquid-chromatography mass spectrometry. The metabolic profile of these participants was compared at the study entry and as close to the diagnosis of TB-IRIS as possible (TB-IRIS window). Molecular features with p < 0.05 and log(2) fold change ≥0.58 were submitted for pathway analysis through MetaboAnalyst. We also elucidated potential metabolic signatures for TB-IRIS using a LASSO regression model. RESULTS: At the study entry, we showed that the arachidonic acid and glycerophospholipid metabolism were altered in the TB-IRIS group. Sphingolipid and linoleic acid metabolism were the most affected pathways during the TB-IRIS window. LASSO modeling selected a set of 8 and 7 molecular features with the potential to predict TB-IRIS at study entry and during the TB-IRIS window, respectively. CONCLUSION: This study suggests that the use of plasma metabolites may distinguish HIV-TB patients with and without TB-IRIS. 2019-04-19 2019-07 /pmc/articles/PMC6613934/ /pubmed/31009738 http://dx.doi.org/10.1016/j.ijid.2019.04.015 Text en This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Article Silva, Carlos A.M. Graham, Barbara Webb, Kristofor Ashton, Laura Vari Harton, Marisa Luetkemeyer, Annie F. Bokatzian, Samantha Almubarak, Reem Mahapatra, Sebabrata Hovind, Laura Kendall, Michelle A. Havlir, Diane Belisle, John T. De Groote, Mary Ann A pilot metabolomics study of tuberculosis immune reconstitution inflammatory syndrome |
title | A pilot metabolomics study of tuberculosis immune reconstitution inflammatory syndrome |
title_full | A pilot metabolomics study of tuberculosis immune reconstitution inflammatory syndrome |
title_fullStr | A pilot metabolomics study of tuberculosis immune reconstitution inflammatory syndrome |
title_full_unstemmed | A pilot metabolomics study of tuberculosis immune reconstitution inflammatory syndrome |
title_short | A pilot metabolomics study of tuberculosis immune reconstitution inflammatory syndrome |
title_sort | pilot metabolomics study of tuberculosis immune reconstitution inflammatory syndrome |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6613934/ https://www.ncbi.nlm.nih.gov/pubmed/31009738 http://dx.doi.org/10.1016/j.ijid.2019.04.015 |
work_keys_str_mv | AT silvacarlosam apilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT grahambarbara apilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT webbkristofor apilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT ashtonlauravari apilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT hartonmarisa apilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT luetkemeyerannief apilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT bokatziansamantha apilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT almubarakreem apilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT mahapatrasebabrata apilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT hovindlaura apilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT kendallmichellea apilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT havlirdiane apilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT belislejohnt apilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT degrootemaryann apilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT silvacarlosam pilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT grahambarbara pilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT webbkristofor pilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT ashtonlauravari pilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT hartonmarisa pilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT luetkemeyerannief pilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT bokatziansamantha pilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT almubarakreem pilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT mahapatrasebabrata pilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT hovindlaura pilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT kendallmichellea pilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT havlirdiane pilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT belislejohnt pilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome AT degrootemaryann pilotmetabolomicsstudyoftuberculosisimmunereconstitutioninflammatorysyndrome |