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Parkinson's Disease Detection Using Isosurfaces-Based Features and Convolutional Neural Networks

Computer aided diagnosis systems based on brain imaging are an important tool to assist in the diagnosis of Parkinson's disease, whose ultimate goal is the detection by automatic recognizing of patterns that characterize the disease. In recent times Convolutional Neural Networks (CNN) have prov...

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Autores principales: Ortiz, Andrés, Munilla, Jorge, Martínez-Ibañez, Manuel, Górriz, Juan M., Ramírez, Javier, Salas-Gonzalez, Diego
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6614282/
https://www.ncbi.nlm.nih.gov/pubmed/31312131
http://dx.doi.org/10.3389/fninf.2019.00048
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author Ortiz, Andrés
Munilla, Jorge
Martínez-Ibañez, Manuel
Górriz, Juan M.
Ramírez, Javier
Salas-Gonzalez, Diego
author_facet Ortiz, Andrés
Munilla, Jorge
Martínez-Ibañez, Manuel
Górriz, Juan M.
Ramírez, Javier
Salas-Gonzalez, Diego
author_sort Ortiz, Andrés
collection PubMed
description Computer aided diagnosis systems based on brain imaging are an important tool to assist in the diagnosis of Parkinson's disease, whose ultimate goal is the detection by automatic recognizing of patterns that characterize the disease. In recent times Convolutional Neural Networks (CNN) have proved to be amazingly useful for that task. The drawback, however, is that 3D brain images contain a huge amount of information that leads to complex CNN architectures. When these architectures become too complex, classification performances often degrades because the limitations of the training algorithm and overfitting. Thus, this paper proposes the use of isosurfaces as a way to reduce such amount of data while keeping the most relevant information. These isosurfaces are then used to implement a classification system which uses two of the most well-known CNN architectures, LeNet and AlexNet, to classify DaTScan images with an average accuracy of 95.1% and AUC = 97%, obtaining comparable (slightly better) values to those obtained for most of the recently proposed systems. It can be concluded therefore that the computation of isosurfaces reduces the complexity of the inputs significantly, resulting in high classification accuracies with reduced computational burden.
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spelling pubmed-66142822019-07-16 Parkinson's Disease Detection Using Isosurfaces-Based Features and Convolutional Neural Networks Ortiz, Andrés Munilla, Jorge Martínez-Ibañez, Manuel Górriz, Juan M. Ramírez, Javier Salas-Gonzalez, Diego Front Neuroinform Neuroscience Computer aided diagnosis systems based on brain imaging are an important tool to assist in the diagnosis of Parkinson's disease, whose ultimate goal is the detection by automatic recognizing of patterns that characterize the disease. In recent times Convolutional Neural Networks (CNN) have proved to be amazingly useful for that task. The drawback, however, is that 3D brain images contain a huge amount of information that leads to complex CNN architectures. When these architectures become too complex, classification performances often degrades because the limitations of the training algorithm and overfitting. Thus, this paper proposes the use of isosurfaces as a way to reduce such amount of data while keeping the most relevant information. These isosurfaces are then used to implement a classification system which uses two of the most well-known CNN architectures, LeNet and AlexNet, to classify DaTScan images with an average accuracy of 95.1% and AUC = 97%, obtaining comparable (slightly better) values to those obtained for most of the recently proposed systems. It can be concluded therefore that the computation of isosurfaces reduces the complexity of the inputs significantly, resulting in high classification accuracies with reduced computational burden. Frontiers Media S.A. 2019-07-02 /pmc/articles/PMC6614282/ /pubmed/31312131 http://dx.doi.org/10.3389/fninf.2019.00048 Text en Copyright © 2019 Ortiz, Munilla, Martínez-Ibañez, Górriz, Ramírez and Salas-Gonzalez. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Ortiz, Andrés
Munilla, Jorge
Martínez-Ibañez, Manuel
Górriz, Juan M.
Ramírez, Javier
Salas-Gonzalez, Diego
Parkinson's Disease Detection Using Isosurfaces-Based Features and Convolutional Neural Networks
title Parkinson's Disease Detection Using Isosurfaces-Based Features and Convolutional Neural Networks
title_full Parkinson's Disease Detection Using Isosurfaces-Based Features and Convolutional Neural Networks
title_fullStr Parkinson's Disease Detection Using Isosurfaces-Based Features and Convolutional Neural Networks
title_full_unstemmed Parkinson's Disease Detection Using Isosurfaces-Based Features and Convolutional Neural Networks
title_short Parkinson's Disease Detection Using Isosurfaces-Based Features and Convolutional Neural Networks
title_sort parkinson's disease detection using isosurfaces-based features and convolutional neural networks
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6614282/
https://www.ncbi.nlm.nih.gov/pubmed/31312131
http://dx.doi.org/10.3389/fninf.2019.00048
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