Cargando…

Urinary Markers of Oxidative Stress in Children with Autism Spectrum Disorder (ASD)

Background: Autism spectrum disorder (ASD) is a developmental disorder characterized by deficits in social interaction, restricted interest and repetitive behavior. Oxidative stress in response to environmental exposure plays a role in virtually every human disease and represents a significant avenu...

Descripción completa

Detalles Bibliográficos
Autores principales: Osredkar, Joško, Gosar, David, Maček, Jerneja, Kumer, Kristina, Fabjan, Teja, Finderle, Petra, Šterpin, Saša, Zupan, Mojca, Jekovec Vrhovšek, Maja
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6616645/
https://www.ncbi.nlm.nih.gov/pubmed/31226814
http://dx.doi.org/10.3390/antiox8060187
_version_ 1783433551841067008
author Osredkar, Joško
Gosar, David
Maček, Jerneja
Kumer, Kristina
Fabjan, Teja
Finderle, Petra
Šterpin, Saša
Zupan, Mojca
Jekovec Vrhovšek, Maja
author_facet Osredkar, Joško
Gosar, David
Maček, Jerneja
Kumer, Kristina
Fabjan, Teja
Finderle, Petra
Šterpin, Saša
Zupan, Mojca
Jekovec Vrhovšek, Maja
author_sort Osredkar, Joško
collection PubMed
description Background: Autism spectrum disorder (ASD) is a developmental disorder characterized by deficits in social interaction, restricted interest and repetitive behavior. Oxidative stress in response to environmental exposure plays a role in virtually every human disease and represents a significant avenue of research into the etiology of ASD. The aim of this study was to explore the diagnostic utility of four urinary biomarkers of oxidative stress. Methods: One hundred and thirty-nine (139) children and adolescents with ASD (89% male, average age = 10.0 years, age range = 2.1 to 18.1 years) and 47 healthy children and adolescents (49% male, average age 9.2, age range = 2.5 to 20.8 years) were recruited for this study. Their urinary 8-OH-dG, 8-isoprostane, dityrosine and hexanoil-lisine were determined by using the ELISA method. Urinary creatinine was determined with the kinetic Jaffee reaction and was used to normalize all biochemical measurements. Non-parametric tests and support vector machines (SVM) with three different kernel functions (linear, radial, polynomial) were used to explore and optimize the multivariate prediction of an ASD diagnosis based on the collected biochemical measurements. The SVM models were first trained using data from a random subset of children and adolescents from the ASD group (n = 70, 90% male, average age = 9.7 years, age range = 2.1 to 17.8 years) and the control group (n = 24, 45.8% male, average age = 9.4 years, age range = 2.5 to 20.8 years) using bootstrapping, with additional synthetic minority over-sampling (SMOTE), which was utilized because of unbalanced data. The computed SVM models were then validated using the remaining data from children and adolescents from the ASD (n = 69, 88% male, average age = 10.2 years, age range = 4.3 to 18.1 years) and the control group (n = 23, 52.2% male, average age = 8.9 years, age range = 2.6 to 16.7 years). Results: Using a non-parametric test, we found a trend showing that the urinary 8-OH-dG concentration was lower in children with ASD compared to the control group (unadjusted p = 0.085). When all four biochemical measurements were combined using SVMs with a radial kernel function, we could predict an ASD diagnosis with a balanced accuracy of 73.4%, thereby accounting for an estimated 20.8% of variance (p < 0.001). The predictive accuracy expressed as the area under the curve (AUC) was solid (95% CI = 0.691–0.908). Using the validation data, we achieved significantly lower rates of classification accuracy as expressed by the balanced accuracy (60.1%), the AUC (95% CI = 0.502–0.781) and the percentage of explained variance (R(2) = 3.8%). Although the radial SVMs showed less predictive power using the validation data, they do, together with ratings of standardized SVM variable importance, provide some indication that urinary levels of 8-OH-dG and 8-isoprostane are predictive of an ASD diagnosis. Conclusions: Our results indicate that the examined urinary biomarkers in combination may differentiate children with ASD from healthy peers to a significant extent. However, the etiological importance of these findings is difficult to assesses, due to the high-dimensional nature of SVMs and a radial kernel function. Nonetheless, our results show that machine learning methods may provide significant insight into ASD and other disorders that could be related to oxidative stress.
format Online
Article
Text
id pubmed-6616645
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-66166452019-07-18 Urinary Markers of Oxidative Stress in Children with Autism Spectrum Disorder (ASD) Osredkar, Joško Gosar, David Maček, Jerneja Kumer, Kristina Fabjan, Teja Finderle, Petra Šterpin, Saša Zupan, Mojca Jekovec Vrhovšek, Maja Antioxidants (Basel) Article Background: Autism spectrum disorder (ASD) is a developmental disorder characterized by deficits in social interaction, restricted interest and repetitive behavior. Oxidative stress in response to environmental exposure plays a role in virtually every human disease and represents a significant avenue of research into the etiology of ASD. The aim of this study was to explore the diagnostic utility of four urinary biomarkers of oxidative stress. Methods: One hundred and thirty-nine (139) children and adolescents with ASD (89% male, average age = 10.0 years, age range = 2.1 to 18.1 years) and 47 healthy children and adolescents (49% male, average age 9.2, age range = 2.5 to 20.8 years) were recruited for this study. Their urinary 8-OH-dG, 8-isoprostane, dityrosine and hexanoil-lisine were determined by using the ELISA method. Urinary creatinine was determined with the kinetic Jaffee reaction and was used to normalize all biochemical measurements. Non-parametric tests and support vector machines (SVM) with three different kernel functions (linear, radial, polynomial) were used to explore and optimize the multivariate prediction of an ASD diagnosis based on the collected biochemical measurements. The SVM models were first trained using data from a random subset of children and adolescents from the ASD group (n = 70, 90% male, average age = 9.7 years, age range = 2.1 to 17.8 years) and the control group (n = 24, 45.8% male, average age = 9.4 years, age range = 2.5 to 20.8 years) using bootstrapping, with additional synthetic minority over-sampling (SMOTE), which was utilized because of unbalanced data. The computed SVM models were then validated using the remaining data from children and adolescents from the ASD (n = 69, 88% male, average age = 10.2 years, age range = 4.3 to 18.1 years) and the control group (n = 23, 52.2% male, average age = 8.9 years, age range = 2.6 to 16.7 years). Results: Using a non-parametric test, we found a trend showing that the urinary 8-OH-dG concentration was lower in children with ASD compared to the control group (unadjusted p = 0.085). When all four biochemical measurements were combined using SVMs with a radial kernel function, we could predict an ASD diagnosis with a balanced accuracy of 73.4%, thereby accounting for an estimated 20.8% of variance (p < 0.001). The predictive accuracy expressed as the area under the curve (AUC) was solid (95% CI = 0.691–0.908). Using the validation data, we achieved significantly lower rates of classification accuracy as expressed by the balanced accuracy (60.1%), the AUC (95% CI = 0.502–0.781) and the percentage of explained variance (R(2) = 3.8%). Although the radial SVMs showed less predictive power using the validation data, they do, together with ratings of standardized SVM variable importance, provide some indication that urinary levels of 8-OH-dG and 8-isoprostane are predictive of an ASD diagnosis. Conclusions: Our results indicate that the examined urinary biomarkers in combination may differentiate children with ASD from healthy peers to a significant extent. However, the etiological importance of these findings is difficult to assesses, due to the high-dimensional nature of SVMs and a radial kernel function. Nonetheless, our results show that machine learning methods may provide significant insight into ASD and other disorders that could be related to oxidative stress. MDPI 2019-06-20 /pmc/articles/PMC6616645/ /pubmed/31226814 http://dx.doi.org/10.3390/antiox8060187 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Osredkar, Joško
Gosar, David
Maček, Jerneja
Kumer, Kristina
Fabjan, Teja
Finderle, Petra
Šterpin, Saša
Zupan, Mojca
Jekovec Vrhovšek, Maja
Urinary Markers of Oxidative Stress in Children with Autism Spectrum Disorder (ASD)
title Urinary Markers of Oxidative Stress in Children with Autism Spectrum Disorder (ASD)
title_full Urinary Markers of Oxidative Stress in Children with Autism Spectrum Disorder (ASD)
title_fullStr Urinary Markers of Oxidative Stress in Children with Autism Spectrum Disorder (ASD)
title_full_unstemmed Urinary Markers of Oxidative Stress in Children with Autism Spectrum Disorder (ASD)
title_short Urinary Markers of Oxidative Stress in Children with Autism Spectrum Disorder (ASD)
title_sort urinary markers of oxidative stress in children with autism spectrum disorder (asd)
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6616645/
https://www.ncbi.nlm.nih.gov/pubmed/31226814
http://dx.doi.org/10.3390/antiox8060187
work_keys_str_mv AT osredkarjosko urinarymarkersofoxidativestressinchildrenwithautismspectrumdisorderasd
AT gosardavid urinarymarkersofoxidativestressinchildrenwithautismspectrumdisorderasd
AT macekjerneja urinarymarkersofoxidativestressinchildrenwithautismspectrumdisorderasd
AT kumerkristina urinarymarkersofoxidativestressinchildrenwithautismspectrumdisorderasd
AT fabjanteja urinarymarkersofoxidativestressinchildrenwithautismspectrumdisorderasd
AT finderlepetra urinarymarkersofoxidativestressinchildrenwithautismspectrumdisorderasd
AT sterpinsasa urinarymarkersofoxidativestressinchildrenwithautismspectrumdisorderasd
AT zupanmojca urinarymarkersofoxidativestressinchildrenwithautismspectrumdisorderasd
AT jekovecvrhovsekmaja urinarymarkersofoxidativestressinchildrenwithautismspectrumdisorderasd