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D‐2‐hydroxyglutaric aciduria Type I: Functional analysis of D2HGDH missense variants

D‐2‐hydroxyglutaric aciduria Type I (D‐2‐HGA Type I), a neurometabolic disorder with a broad clinical spectrum, is caused by recessive variants in the D2HGDH gene encoding D‐2‐hydroxyglutarate dehydrogenase (D‐2‐HGDH). We and others detected 42 potentially pathogenic variants in D2HGDH of which 31 w...

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Autores principales: Pop, Ana, Struys, Eduard A., Jansen, Erwin E. W., Fernandez, Matilde R., Kanhai, Warsha A., van Dooren, Silvy J. M., Ozturk, Senay, van Oostendorp, Justin, Lennertz, Pascal, Kranendijk, Martijn, van der Knaap, Marjo S., Gibson, K. Michael, van Schaftingen, Emile, Salomons, Gajja S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6619364/
https://www.ncbi.nlm.nih.gov/pubmed/30908763
http://dx.doi.org/10.1002/humu.23751
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author Pop, Ana
Struys, Eduard A.
Jansen, Erwin E. W.
Fernandez, Matilde R.
Kanhai, Warsha A.
van Dooren, Silvy J. M.
Ozturk, Senay
van Oostendorp, Justin
Lennertz, Pascal
Kranendijk, Martijn
van der Knaap, Marjo S.
Gibson, K. Michael
van Schaftingen, Emile
Salomons, Gajja S.
author_facet Pop, Ana
Struys, Eduard A.
Jansen, Erwin E. W.
Fernandez, Matilde R.
Kanhai, Warsha A.
van Dooren, Silvy J. M.
Ozturk, Senay
van Oostendorp, Justin
Lennertz, Pascal
Kranendijk, Martijn
van der Knaap, Marjo S.
Gibson, K. Michael
van Schaftingen, Emile
Salomons, Gajja S.
author_sort Pop, Ana
collection PubMed
description D‐2‐hydroxyglutaric aciduria Type I (D‐2‐HGA Type I), a neurometabolic disorder with a broad clinical spectrum, is caused by recessive variants in the D2HGDH gene encoding D‐2‐hydroxyglutarate dehydrogenase (D‐2‐HGDH). We and others detected 42 potentially pathogenic variants in D2HGDH of which 31 were missense. We developed functional studies to investigate the effect of missense variants on D‐2‐HGDH catalytic activity. Site‐directed mutagenesis was used to introduce 31 missense variants in the pCMV5‐D2HGDH expression vector. The wild type and missense variants were overexpressed in HEK293 cells. D‐2‐HGDH enzyme activity was evaluated based on the conversion of [(2)H(4)]D‐2‐HG to [(2)H(4)]2‐ketoglutarate, which was subsequently converted into [(2)H(4)]L‐glutamate and the latter quantified by LC‐MS/MS. Eighteen variants resulted in almost complete ablation of D‐2‐HGDH activity and thus, should be considered pathogenic. The remaining 13 variants manifested residual activities ranging between 17% and 94% of control enzymatic activity. Our functional assay evaluating the effect of novel D2HGDH variants will be beneficial for the classification of missense variants and determination of pathogenicity.
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spelling pubmed-66193642019-07-22 D‐2‐hydroxyglutaric aciduria Type I: Functional analysis of D2HGDH missense variants Pop, Ana Struys, Eduard A. Jansen, Erwin E. W. Fernandez, Matilde R. Kanhai, Warsha A. van Dooren, Silvy J. M. Ozturk, Senay van Oostendorp, Justin Lennertz, Pascal Kranendijk, Martijn van der Knaap, Marjo S. Gibson, K. Michael van Schaftingen, Emile Salomons, Gajja S. Hum Mutat Research Articles D‐2‐hydroxyglutaric aciduria Type I (D‐2‐HGA Type I), a neurometabolic disorder with a broad clinical spectrum, is caused by recessive variants in the D2HGDH gene encoding D‐2‐hydroxyglutarate dehydrogenase (D‐2‐HGDH). We and others detected 42 potentially pathogenic variants in D2HGDH of which 31 were missense. We developed functional studies to investigate the effect of missense variants on D‐2‐HGDH catalytic activity. Site‐directed mutagenesis was used to introduce 31 missense variants in the pCMV5‐D2HGDH expression vector. The wild type and missense variants were overexpressed in HEK293 cells. D‐2‐HGDH enzyme activity was evaluated based on the conversion of [(2)H(4)]D‐2‐HG to [(2)H(4)]2‐ketoglutarate, which was subsequently converted into [(2)H(4)]L‐glutamate and the latter quantified by LC‐MS/MS. Eighteen variants resulted in almost complete ablation of D‐2‐HGDH activity and thus, should be considered pathogenic. The remaining 13 variants manifested residual activities ranging between 17% and 94% of control enzymatic activity. Our functional assay evaluating the effect of novel D2HGDH variants will be beneficial for the classification of missense variants and determination of pathogenicity. John Wiley and Sons Inc. 2019-04-13 2019-07 /pmc/articles/PMC6619364/ /pubmed/30908763 http://dx.doi.org/10.1002/humu.23751 Text en © 2019 Human Mutation Published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Pop, Ana
Struys, Eduard A.
Jansen, Erwin E. W.
Fernandez, Matilde R.
Kanhai, Warsha A.
van Dooren, Silvy J. M.
Ozturk, Senay
van Oostendorp, Justin
Lennertz, Pascal
Kranendijk, Martijn
van der Knaap, Marjo S.
Gibson, K. Michael
van Schaftingen, Emile
Salomons, Gajja S.
D‐2‐hydroxyglutaric aciduria Type I: Functional analysis of D2HGDH missense variants
title D‐2‐hydroxyglutaric aciduria Type I: Functional analysis of D2HGDH missense variants
title_full D‐2‐hydroxyglutaric aciduria Type I: Functional analysis of D2HGDH missense variants
title_fullStr D‐2‐hydroxyglutaric aciduria Type I: Functional analysis of D2HGDH missense variants
title_full_unstemmed D‐2‐hydroxyglutaric aciduria Type I: Functional analysis of D2HGDH missense variants
title_short D‐2‐hydroxyglutaric aciduria Type I: Functional analysis of D2HGDH missense variants
title_sort d‐2‐hydroxyglutaric aciduria type i: functional analysis of d2hgdh missense variants
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6619364/
https://www.ncbi.nlm.nih.gov/pubmed/30908763
http://dx.doi.org/10.1002/humu.23751
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