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Amplicon targeted resequencing for SLC2A9 and SLC22A12 identified novel mutations in hypouricemia subjects

BACKGROUND: To identify potential causative mutations in SLC2A9 and SLC22A12 that lead to hypouricemia or hyperuricemia (HUA). METHODS: Targeted resequencing of whole exon regions of SLC2A9 and SLC22A12 was performed in three cohorts of 31 hypouricemia, 288 HUA and 280 normal controls. RESULTS: A to...

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Autores principales: Zhou, Zhaowei, Wang, Ke, Zhou, Juan, Wang, Can, Li, Xinde, Cui, Lingling, Han, Lin, Liu, Zhen, Ren, Wei, Wang, Xuefeng, Zhang, Keke, Li, Zhiqiang, Pan, Dun, Li, Changgui, Shi, Yongyong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6625124/
https://www.ncbi.nlm.nih.gov/pubmed/31131560
http://dx.doi.org/10.1002/mgg3.722
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author Zhou, Zhaowei
Wang, Ke
Zhou, Juan
Wang, Can
Li, Xinde
Cui, Lingling
Han, Lin
Liu, Zhen
Ren, Wei
Wang, Xuefeng
Zhang, Keke
Li, Zhiqiang
Pan, Dun
Li, Changgui
Shi, Yongyong
author_facet Zhou, Zhaowei
Wang, Ke
Zhou, Juan
Wang, Can
Li, Xinde
Cui, Lingling
Han, Lin
Liu, Zhen
Ren, Wei
Wang, Xuefeng
Zhang, Keke
Li, Zhiqiang
Pan, Dun
Li, Changgui
Shi, Yongyong
author_sort Zhou, Zhaowei
collection PubMed
description BACKGROUND: To identify potential causative mutations in SLC2A9 and SLC22A12 that lead to hypouricemia or hyperuricemia (HUA). METHODS: Targeted resequencing of whole exon regions of SLC2A9 and SLC22A12 was performed in three cohorts of 31 hypouricemia, 288 HUA and 280 normal controls. RESULTS: A total of 84 high‐quality variants were identified in these three cohorts. Eighteen variants were nonsynonymous or in splicing region, and then included in the following association analysis. For common variants, no significant effects on hypouricemia or HUA were identified. For rare variants, six single nucleotide variations (SNVs) p.T21I and p.G13D in SLC2A9, p.W50fs, p.Q382L, p.V547L and p.E458K in SLC22A12, occurred in totally six hypouricemia subjects and were absent in HUA and normal controls. Allelic and genotypic frequency distributions of the six SNVs differed significantly between the hypouricemia and normal controls even after multiple testing correction, and p.G13D in SLC2A9 and p.V547L in SLC22A12 were newly reported. All these mutations had no significant effects on HUA susceptibility, while the gene‐based analyses substantiated the significant results on hypouricemia. CONCLUSION: Our study first presents a comprehensive mutation spectrum of hypouricemia in a large Chinese cohort.
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spelling pubmed-66251242019-07-17 Amplicon targeted resequencing for SLC2A9 and SLC22A12 identified novel mutations in hypouricemia subjects Zhou, Zhaowei Wang, Ke Zhou, Juan Wang, Can Li, Xinde Cui, Lingling Han, Lin Liu, Zhen Ren, Wei Wang, Xuefeng Zhang, Keke Li, Zhiqiang Pan, Dun Li, Changgui Shi, Yongyong Mol Genet Genomic Med Original Articles BACKGROUND: To identify potential causative mutations in SLC2A9 and SLC22A12 that lead to hypouricemia or hyperuricemia (HUA). METHODS: Targeted resequencing of whole exon regions of SLC2A9 and SLC22A12 was performed in three cohorts of 31 hypouricemia, 288 HUA and 280 normal controls. RESULTS: A total of 84 high‐quality variants were identified in these three cohorts. Eighteen variants were nonsynonymous or in splicing region, and then included in the following association analysis. For common variants, no significant effects on hypouricemia or HUA were identified. For rare variants, six single nucleotide variations (SNVs) p.T21I and p.G13D in SLC2A9, p.W50fs, p.Q382L, p.V547L and p.E458K in SLC22A12, occurred in totally six hypouricemia subjects and were absent in HUA and normal controls. Allelic and genotypic frequency distributions of the six SNVs differed significantly between the hypouricemia and normal controls even after multiple testing correction, and p.G13D in SLC2A9 and p.V547L in SLC22A12 were newly reported. All these mutations had no significant effects on HUA susceptibility, while the gene‐based analyses substantiated the significant results on hypouricemia. CONCLUSION: Our study first presents a comprehensive mutation spectrum of hypouricemia in a large Chinese cohort. John Wiley and Sons Inc. 2019-05-26 /pmc/articles/PMC6625124/ /pubmed/31131560 http://dx.doi.org/10.1002/mgg3.722 Text en © 2019 The Authors. Molecular Genetics & Genomic Medicine published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Zhou, Zhaowei
Wang, Ke
Zhou, Juan
Wang, Can
Li, Xinde
Cui, Lingling
Han, Lin
Liu, Zhen
Ren, Wei
Wang, Xuefeng
Zhang, Keke
Li, Zhiqiang
Pan, Dun
Li, Changgui
Shi, Yongyong
Amplicon targeted resequencing for SLC2A9 and SLC22A12 identified novel mutations in hypouricemia subjects
title Amplicon targeted resequencing for SLC2A9 and SLC22A12 identified novel mutations in hypouricemia subjects
title_full Amplicon targeted resequencing for SLC2A9 and SLC22A12 identified novel mutations in hypouricemia subjects
title_fullStr Amplicon targeted resequencing for SLC2A9 and SLC22A12 identified novel mutations in hypouricemia subjects
title_full_unstemmed Amplicon targeted resequencing for SLC2A9 and SLC22A12 identified novel mutations in hypouricemia subjects
title_short Amplicon targeted resequencing for SLC2A9 and SLC22A12 identified novel mutations in hypouricemia subjects
title_sort amplicon targeted resequencing for slc2a9 and slc22a12 identified novel mutations in hypouricemia subjects
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6625124/
https://www.ncbi.nlm.nih.gov/pubmed/31131560
http://dx.doi.org/10.1002/mgg3.722
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