Cargando…
Amplicon targeted resequencing for SLC2A9 and SLC22A12 identified novel mutations in hypouricemia subjects
BACKGROUND: To identify potential causative mutations in SLC2A9 and SLC22A12 that lead to hypouricemia or hyperuricemia (HUA). METHODS: Targeted resequencing of whole exon regions of SLC2A9 and SLC22A12 was performed in three cohorts of 31 hypouricemia, 288 HUA and 280 normal controls. RESULTS: A to...
Autores principales: | , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6625124/ https://www.ncbi.nlm.nih.gov/pubmed/31131560 http://dx.doi.org/10.1002/mgg3.722 |
_version_ | 1783434355388973056 |
---|---|
author | Zhou, Zhaowei Wang, Ke Zhou, Juan Wang, Can Li, Xinde Cui, Lingling Han, Lin Liu, Zhen Ren, Wei Wang, Xuefeng Zhang, Keke Li, Zhiqiang Pan, Dun Li, Changgui Shi, Yongyong |
author_facet | Zhou, Zhaowei Wang, Ke Zhou, Juan Wang, Can Li, Xinde Cui, Lingling Han, Lin Liu, Zhen Ren, Wei Wang, Xuefeng Zhang, Keke Li, Zhiqiang Pan, Dun Li, Changgui Shi, Yongyong |
author_sort | Zhou, Zhaowei |
collection | PubMed |
description | BACKGROUND: To identify potential causative mutations in SLC2A9 and SLC22A12 that lead to hypouricemia or hyperuricemia (HUA). METHODS: Targeted resequencing of whole exon regions of SLC2A9 and SLC22A12 was performed in three cohorts of 31 hypouricemia, 288 HUA and 280 normal controls. RESULTS: A total of 84 high‐quality variants were identified in these three cohorts. Eighteen variants were nonsynonymous or in splicing region, and then included in the following association analysis. For common variants, no significant effects on hypouricemia or HUA were identified. For rare variants, six single nucleotide variations (SNVs) p.T21I and p.G13D in SLC2A9, p.W50fs, p.Q382L, p.V547L and p.E458K in SLC22A12, occurred in totally six hypouricemia subjects and were absent in HUA and normal controls. Allelic and genotypic frequency distributions of the six SNVs differed significantly between the hypouricemia and normal controls even after multiple testing correction, and p.G13D in SLC2A9 and p.V547L in SLC22A12 were newly reported. All these mutations had no significant effects on HUA susceptibility, while the gene‐based analyses substantiated the significant results on hypouricemia. CONCLUSION: Our study first presents a comprehensive mutation spectrum of hypouricemia in a large Chinese cohort. |
format | Online Article Text |
id | pubmed-6625124 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-66251242019-07-17 Amplicon targeted resequencing for SLC2A9 and SLC22A12 identified novel mutations in hypouricemia subjects Zhou, Zhaowei Wang, Ke Zhou, Juan Wang, Can Li, Xinde Cui, Lingling Han, Lin Liu, Zhen Ren, Wei Wang, Xuefeng Zhang, Keke Li, Zhiqiang Pan, Dun Li, Changgui Shi, Yongyong Mol Genet Genomic Med Original Articles BACKGROUND: To identify potential causative mutations in SLC2A9 and SLC22A12 that lead to hypouricemia or hyperuricemia (HUA). METHODS: Targeted resequencing of whole exon regions of SLC2A9 and SLC22A12 was performed in three cohorts of 31 hypouricemia, 288 HUA and 280 normal controls. RESULTS: A total of 84 high‐quality variants were identified in these three cohorts. Eighteen variants were nonsynonymous or in splicing region, and then included in the following association analysis. For common variants, no significant effects on hypouricemia or HUA were identified. For rare variants, six single nucleotide variations (SNVs) p.T21I and p.G13D in SLC2A9, p.W50fs, p.Q382L, p.V547L and p.E458K in SLC22A12, occurred in totally six hypouricemia subjects and were absent in HUA and normal controls. Allelic and genotypic frequency distributions of the six SNVs differed significantly between the hypouricemia and normal controls even after multiple testing correction, and p.G13D in SLC2A9 and p.V547L in SLC22A12 were newly reported. All these mutations had no significant effects on HUA susceptibility, while the gene‐based analyses substantiated the significant results on hypouricemia. CONCLUSION: Our study first presents a comprehensive mutation spectrum of hypouricemia in a large Chinese cohort. John Wiley and Sons Inc. 2019-05-26 /pmc/articles/PMC6625124/ /pubmed/31131560 http://dx.doi.org/10.1002/mgg3.722 Text en © 2019 The Authors. Molecular Genetics & Genomic Medicine published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Zhou, Zhaowei Wang, Ke Zhou, Juan Wang, Can Li, Xinde Cui, Lingling Han, Lin Liu, Zhen Ren, Wei Wang, Xuefeng Zhang, Keke Li, Zhiqiang Pan, Dun Li, Changgui Shi, Yongyong Amplicon targeted resequencing for SLC2A9 and SLC22A12 identified novel mutations in hypouricemia subjects |
title | Amplicon targeted resequencing for SLC2A9 and SLC22A12 identified novel mutations in hypouricemia subjects |
title_full | Amplicon targeted resequencing for SLC2A9 and SLC22A12 identified novel mutations in hypouricemia subjects |
title_fullStr | Amplicon targeted resequencing for SLC2A9 and SLC22A12 identified novel mutations in hypouricemia subjects |
title_full_unstemmed | Amplicon targeted resequencing for SLC2A9 and SLC22A12 identified novel mutations in hypouricemia subjects |
title_short | Amplicon targeted resequencing for SLC2A9 and SLC22A12 identified novel mutations in hypouricemia subjects |
title_sort | amplicon targeted resequencing for slc2a9 and slc22a12 identified novel mutations in hypouricemia subjects |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6625124/ https://www.ncbi.nlm.nih.gov/pubmed/31131560 http://dx.doi.org/10.1002/mgg3.722 |
work_keys_str_mv | AT zhouzhaowei amplicontargetedresequencingforslc2a9andslc22a12identifiednovelmutationsinhypouricemiasubjects AT wangke amplicontargetedresequencingforslc2a9andslc22a12identifiednovelmutationsinhypouricemiasubjects AT zhoujuan amplicontargetedresequencingforslc2a9andslc22a12identifiednovelmutationsinhypouricemiasubjects AT wangcan amplicontargetedresequencingforslc2a9andslc22a12identifiednovelmutationsinhypouricemiasubjects AT lixinde amplicontargetedresequencingforslc2a9andslc22a12identifiednovelmutationsinhypouricemiasubjects AT cuilingling amplicontargetedresequencingforslc2a9andslc22a12identifiednovelmutationsinhypouricemiasubjects AT hanlin amplicontargetedresequencingforslc2a9andslc22a12identifiednovelmutationsinhypouricemiasubjects AT liuzhen amplicontargetedresequencingforslc2a9andslc22a12identifiednovelmutationsinhypouricemiasubjects AT renwei amplicontargetedresequencingforslc2a9andslc22a12identifiednovelmutationsinhypouricemiasubjects AT wangxuefeng amplicontargetedresequencingforslc2a9andslc22a12identifiednovelmutationsinhypouricemiasubjects AT zhangkeke amplicontargetedresequencingforslc2a9andslc22a12identifiednovelmutationsinhypouricemiasubjects AT lizhiqiang amplicontargetedresequencingforslc2a9andslc22a12identifiednovelmutationsinhypouricemiasubjects AT pandun amplicontargetedresequencingforslc2a9andslc22a12identifiednovelmutationsinhypouricemiasubjects AT lichanggui amplicontargetedresequencingforslc2a9andslc22a12identifiednovelmutationsinhypouricemiasubjects AT shiyongyong amplicontargetedresequencingforslc2a9andslc22a12identifiednovelmutationsinhypouricemiasubjects |