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Exome sequencing identifies a KRT9 pathogenic variant in a Chinese pedigree with epidermolytic palmoplantar keratoderma

BACKGROUND: Epidermolytic palmoplantar keratoderma (EPPK) is a rare skin disorder and its pathogenesis and inheritability are unknown. OBJECTIVE: To investigate the inheritance and pathogenesis of EPPK. METHODS: Two EPPK cases occurred in a three‐generation Chinese family. Patient–parents trio EPPK...

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Autores principales: Li, Changxing, Chen, Pingjiao, Sun, Silong, Zeng, Kang, Liang, Jingyao, Wang, Qi, Zhang, Sanquan, Xu, Meinian, Li, Zhijia, Zhang, Xibao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6625362/
https://www.ncbi.nlm.nih.gov/pubmed/31074163
http://dx.doi.org/10.1002/mgg3.703
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author Li, Changxing
Chen, Pingjiao
Sun, Silong
Zeng, Kang
Liang, Jingyao
Wang, Qi
Zhang, Sanquan
Xu, Meinian
Li, Zhijia
Zhang, Xibao
author_facet Li, Changxing
Chen, Pingjiao
Sun, Silong
Zeng, Kang
Liang, Jingyao
Wang, Qi
Zhang, Sanquan
Xu, Meinian
Li, Zhijia
Zhang, Xibao
author_sort Li, Changxing
collection PubMed
description BACKGROUND: Epidermolytic palmoplantar keratoderma (EPPK) is a rare skin disorder and its pathogenesis and inheritability are unknown. OBJECTIVE: To investigate the inheritance and pathogenesis of EPPK. METHODS: Two EPPK cases occurred in a three‐generation Chinese family. Patient–parents trio EPPK was carried out and the identified candidate variants were confirmed by Sanger sequencing. RESULTS: A heterozygous missense pathogenic variant, c.488G > A (p.Arg163Gln), in the keratin (KRT) 9 gene was detected in the proband and his son via targeted exome sequencing, and then validated by Sanger sequencing. This pathogenic variant cosegregated with the EPPK in extended family members, and was predicted to be pathogenic by SIFT, PolyPhen2, PROVEAN, and Mutation Taster. This heterozygous variation was not evident in 100 healthy controls. CONCLUSION: This report describes a KRT9 c.488G > A (p.Arg163Gln) variant causing a diffuse phenotype of Chinese EPPK. The current results broaden the spectrum of KRT9 pathogenic variants responsible for EPPK and have important implications for molecular diagnosis, treatment, and genetic counseling for this family.
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spelling pubmed-66253622019-07-17 Exome sequencing identifies a KRT9 pathogenic variant in a Chinese pedigree with epidermolytic palmoplantar keratoderma Li, Changxing Chen, Pingjiao Sun, Silong Zeng, Kang Liang, Jingyao Wang, Qi Zhang, Sanquan Xu, Meinian Li, Zhijia Zhang, Xibao Mol Genet Genomic Med Clinical Reports BACKGROUND: Epidermolytic palmoplantar keratoderma (EPPK) is a rare skin disorder and its pathogenesis and inheritability are unknown. OBJECTIVE: To investigate the inheritance and pathogenesis of EPPK. METHODS: Two EPPK cases occurred in a three‐generation Chinese family. Patient–parents trio EPPK was carried out and the identified candidate variants were confirmed by Sanger sequencing. RESULTS: A heterozygous missense pathogenic variant, c.488G > A (p.Arg163Gln), in the keratin (KRT) 9 gene was detected in the proband and his son via targeted exome sequencing, and then validated by Sanger sequencing. This pathogenic variant cosegregated with the EPPK in extended family members, and was predicted to be pathogenic by SIFT, PolyPhen2, PROVEAN, and Mutation Taster. This heterozygous variation was not evident in 100 healthy controls. CONCLUSION: This report describes a KRT9 c.488G > A (p.Arg163Gln) variant causing a diffuse phenotype of Chinese EPPK. The current results broaden the spectrum of KRT9 pathogenic variants responsible for EPPK and have important implications for molecular diagnosis, treatment, and genetic counseling for this family. John Wiley and Sons Inc. 2019-05-09 /pmc/articles/PMC6625362/ /pubmed/31074163 http://dx.doi.org/10.1002/mgg3.703 Text en © 2019 The Authors. Molecular Genetics & Genomic Medicine published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Clinical Reports
Li, Changxing
Chen, Pingjiao
Sun, Silong
Zeng, Kang
Liang, Jingyao
Wang, Qi
Zhang, Sanquan
Xu, Meinian
Li, Zhijia
Zhang, Xibao
Exome sequencing identifies a KRT9 pathogenic variant in a Chinese pedigree with epidermolytic palmoplantar keratoderma
title Exome sequencing identifies a KRT9 pathogenic variant in a Chinese pedigree with epidermolytic palmoplantar keratoderma
title_full Exome sequencing identifies a KRT9 pathogenic variant in a Chinese pedigree with epidermolytic palmoplantar keratoderma
title_fullStr Exome sequencing identifies a KRT9 pathogenic variant in a Chinese pedigree with epidermolytic palmoplantar keratoderma
title_full_unstemmed Exome sequencing identifies a KRT9 pathogenic variant in a Chinese pedigree with epidermolytic palmoplantar keratoderma
title_short Exome sequencing identifies a KRT9 pathogenic variant in a Chinese pedigree with epidermolytic palmoplantar keratoderma
title_sort exome sequencing identifies a krt9 pathogenic variant in a chinese pedigree with epidermolytic palmoplantar keratoderma
topic Clinical Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6625362/
https://www.ncbi.nlm.nih.gov/pubmed/31074163
http://dx.doi.org/10.1002/mgg3.703
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