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A comparison of genomic laboratory reports and observations that may enhance their clinical utility for providers and patients

PURPOSE: To assess clinical chromosomal microarray (CMA) genomic testing reports for the following: (a) usage of reporting elements consistent with 2011 ACMG guidelines and other elements identified in the primary literature, (b) information quality, and (c) readability. METHODS: We retrospectively...

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Autores principales: Davis, Kyle Walter, Hamby Erby, Lori, Fiallos, Katie, Martin, Megan, Wassman, Edward Robert
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6625363/
https://www.ncbi.nlm.nih.gov/pubmed/31115190
http://dx.doi.org/10.1002/mgg3.551
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author Davis, Kyle Walter
Hamby Erby, Lori
Fiallos, Katie
Martin, Megan
Wassman, Edward Robert
author_facet Davis, Kyle Walter
Hamby Erby, Lori
Fiallos, Katie
Martin, Megan
Wassman, Edward Robert
author_sort Davis, Kyle Walter
collection PubMed
description PURPOSE: To assess clinical chromosomal microarray (CMA) genomic testing reports for the following: (a) usage of reporting elements consistent with 2011 ACMG guidelines and other elements identified in the primary literature, (b) information quality, and (c) readability. METHODS: We retrospectively analyzed genomic testing reports from 2011 to 2016 provided to, or by our laboratory to aid in clinical detection and interpretation of copy number variants. Analysis was restricted to the following sections: interpretation, recommendations, limitations, and citations. Analysis included descriptive characteristics, reporting elements, reading difficulty using the Simple Measure of Gobbledygook (SMOG), and quality ratings using a subset of questions adapted from the DISCERN‐Genetics questionnaire. RESULTS: The analysis included 44 unique reports from 26 laboratories comprising four groups: specialty laboratories (SL; N = 9), reference laboratories (RL; N = 12), hospital laboratories (HL; N = 10), and university‐based laboratories (UL; N = 13). There were 23 abnormal/pathogenic reports and 21 of uncertain/unknown significance. Nine laboratories did not include one or more pieces of information based on ACMG guidelines; only one of ten laboratories reported condition‐specific management/treatment information when available and relevant. Average quality ratings and readability scores were not significantly different between laboratory types or result classification. CONCLUSIONS: Reporting practices for most report elements varied widely; however, readability and quality did not differ significantly between laboratory types. Management and treatment information, even for well‐known conditions, are rarely included. Effectively communicating test results may be improved if certain reporting elements are incorporated. Recommendations to improve laboratory reports are provided.
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spelling pubmed-66253632019-07-17 A comparison of genomic laboratory reports and observations that may enhance their clinical utility for providers and patients Davis, Kyle Walter Hamby Erby, Lori Fiallos, Katie Martin, Megan Wassman, Edward Robert Mol Genet Genomic Med Original Articles PURPOSE: To assess clinical chromosomal microarray (CMA) genomic testing reports for the following: (a) usage of reporting elements consistent with 2011 ACMG guidelines and other elements identified in the primary literature, (b) information quality, and (c) readability. METHODS: We retrospectively analyzed genomic testing reports from 2011 to 2016 provided to, or by our laboratory to aid in clinical detection and interpretation of copy number variants. Analysis was restricted to the following sections: interpretation, recommendations, limitations, and citations. Analysis included descriptive characteristics, reporting elements, reading difficulty using the Simple Measure of Gobbledygook (SMOG), and quality ratings using a subset of questions adapted from the DISCERN‐Genetics questionnaire. RESULTS: The analysis included 44 unique reports from 26 laboratories comprising four groups: specialty laboratories (SL; N = 9), reference laboratories (RL; N = 12), hospital laboratories (HL; N = 10), and university‐based laboratories (UL; N = 13). There were 23 abnormal/pathogenic reports and 21 of uncertain/unknown significance. Nine laboratories did not include one or more pieces of information based on ACMG guidelines; only one of ten laboratories reported condition‐specific management/treatment information when available and relevant. Average quality ratings and readability scores were not significantly different between laboratory types or result classification. CONCLUSIONS: Reporting practices for most report elements varied widely; however, readability and quality did not differ significantly between laboratory types. Management and treatment information, even for well‐known conditions, are rarely included. Effectively communicating test results may be improved if certain reporting elements are incorporated. Recommendations to improve laboratory reports are provided. John Wiley and Sons Inc. 2019-05-21 /pmc/articles/PMC6625363/ /pubmed/31115190 http://dx.doi.org/10.1002/mgg3.551 Text en © 2019 Lineagen, Inc. Molecular Genetics & Genomic Medicine published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Davis, Kyle Walter
Hamby Erby, Lori
Fiallos, Katie
Martin, Megan
Wassman, Edward Robert
A comparison of genomic laboratory reports and observations that may enhance their clinical utility for providers and patients
title A comparison of genomic laboratory reports and observations that may enhance their clinical utility for providers and patients
title_full A comparison of genomic laboratory reports and observations that may enhance their clinical utility for providers and patients
title_fullStr A comparison of genomic laboratory reports and observations that may enhance their clinical utility for providers and patients
title_full_unstemmed A comparison of genomic laboratory reports and observations that may enhance their clinical utility for providers and patients
title_short A comparison of genomic laboratory reports and observations that may enhance their clinical utility for providers and patients
title_sort comparison of genomic laboratory reports and observations that may enhance their clinical utility for providers and patients
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6625363/
https://www.ncbi.nlm.nih.gov/pubmed/31115190
http://dx.doi.org/10.1002/mgg3.551
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