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A unified multi-kingdom Golden Gate cloning platform

Assembling composite DNA modules from custom DNA parts has become routine due to recent technological breakthroughs such as Golden Gate modular cloning. Using Golden Gate, one can efficiently assemble custom transcription units and piece units together to generate higher-order assemblies. Although G...

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Autores principales: Chiasson, David, Giménez-Oya, Victor, Bircheneder, Martin, Bachmaier, Sabine, Studtrucker, Tanja, Ryan, Joel, Sollweck, Katharina, Leonhardt, Heinrich, Boshart, Michael, Dietrich, Petra, Parniske, Martin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6626145/
https://www.ncbi.nlm.nih.gov/pubmed/31300661
http://dx.doi.org/10.1038/s41598-019-46171-2
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author Chiasson, David
Giménez-Oya, Victor
Bircheneder, Martin
Bachmaier, Sabine
Studtrucker, Tanja
Ryan, Joel
Sollweck, Katharina
Leonhardt, Heinrich
Boshart, Michael
Dietrich, Petra
Parniske, Martin
author_facet Chiasson, David
Giménez-Oya, Victor
Bircheneder, Martin
Bachmaier, Sabine
Studtrucker, Tanja
Ryan, Joel
Sollweck, Katharina
Leonhardt, Heinrich
Boshart, Michael
Dietrich, Petra
Parniske, Martin
author_sort Chiasson, David
collection PubMed
description Assembling composite DNA modules from custom DNA parts has become routine due to recent technological breakthroughs such as Golden Gate modular cloning. Using Golden Gate, one can efficiently assemble custom transcription units and piece units together to generate higher-order assemblies. Although Golden Gate cloning systems have been developed to assemble DNA plasmids required for experimental work in model species, they are not typically applicable to organisms from other kingdoms. Consequently, a typical molecular biology laboratory working across kingdoms must use multiple cloning strategies to assemble DNA constructs for experimental assays. To simplify the DNA assembly process, we developed a multi-kingdom (MK) Golden Gate assembly platform for experimental work in species from the kingdoms Fungi, Eubacteria, Protista, Plantae, and Animalia. Plasmid backbone and part overhangs are consistent across the platform, saving both time and resources in the laboratory. We demonstrate the functionality of the system by performing a variety of experiments across kingdoms including genome editing, fluorescence microscopy, and protein interaction assays. The versatile MK system therefore streamlines the assembly of modular DNA constructs for biological assays across a range of model organisms.
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spelling pubmed-66261452019-07-21 A unified multi-kingdom Golden Gate cloning platform Chiasson, David Giménez-Oya, Victor Bircheneder, Martin Bachmaier, Sabine Studtrucker, Tanja Ryan, Joel Sollweck, Katharina Leonhardt, Heinrich Boshart, Michael Dietrich, Petra Parniske, Martin Sci Rep Article Assembling composite DNA modules from custom DNA parts has become routine due to recent technological breakthroughs such as Golden Gate modular cloning. Using Golden Gate, one can efficiently assemble custom transcription units and piece units together to generate higher-order assemblies. Although Golden Gate cloning systems have been developed to assemble DNA plasmids required for experimental work in model species, they are not typically applicable to organisms from other kingdoms. Consequently, a typical molecular biology laboratory working across kingdoms must use multiple cloning strategies to assemble DNA constructs for experimental assays. To simplify the DNA assembly process, we developed a multi-kingdom (MK) Golden Gate assembly platform for experimental work in species from the kingdoms Fungi, Eubacteria, Protista, Plantae, and Animalia. Plasmid backbone and part overhangs are consistent across the platform, saving both time and resources in the laboratory. We demonstrate the functionality of the system by performing a variety of experiments across kingdoms including genome editing, fluorescence microscopy, and protein interaction assays. The versatile MK system therefore streamlines the assembly of modular DNA constructs for biological assays across a range of model organisms. Nature Publishing Group UK 2019-07-12 /pmc/articles/PMC6626145/ /pubmed/31300661 http://dx.doi.org/10.1038/s41598-019-46171-2 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Chiasson, David
Giménez-Oya, Victor
Bircheneder, Martin
Bachmaier, Sabine
Studtrucker, Tanja
Ryan, Joel
Sollweck, Katharina
Leonhardt, Heinrich
Boshart, Michael
Dietrich, Petra
Parniske, Martin
A unified multi-kingdom Golden Gate cloning platform
title A unified multi-kingdom Golden Gate cloning platform
title_full A unified multi-kingdom Golden Gate cloning platform
title_fullStr A unified multi-kingdom Golden Gate cloning platform
title_full_unstemmed A unified multi-kingdom Golden Gate cloning platform
title_short A unified multi-kingdom Golden Gate cloning platform
title_sort unified multi-kingdom golden gate cloning platform
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6626145/
https://www.ncbi.nlm.nih.gov/pubmed/31300661
http://dx.doi.org/10.1038/s41598-019-46171-2
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