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Identification of Fatty Acid Desaturases in Maize and Their Differential Responses to Low and High Temperature
Plant fatty acid desaturases (FADs) catalyze the desaturation of fatty acids in various forms and play important roles in regulating fatty acid composition and maintaining membrane fluidity under temperature stress. A total of 30 FADs were identified from a maize genome, including 13 soluble and 17...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6627218/ https://www.ncbi.nlm.nih.gov/pubmed/31210171 http://dx.doi.org/10.3390/genes10060445 |
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author | Zhao, Xunchao Wei, Jinpeng He, Lin Zhang, Yifei Zhao, Ying Xu, Xiaoxuan Wei, Yulei Ge, Shengnan Ding, Dong Liu, Meng Gao, Shuren Xu, Jingyu |
author_facet | Zhao, Xunchao Wei, Jinpeng He, Lin Zhang, Yifei Zhao, Ying Xu, Xiaoxuan Wei, Yulei Ge, Shengnan Ding, Dong Liu, Meng Gao, Shuren Xu, Jingyu |
author_sort | Zhao, Xunchao |
collection | PubMed |
description | Plant fatty acid desaturases (FADs) catalyze the desaturation of fatty acids in various forms and play important roles in regulating fatty acid composition and maintaining membrane fluidity under temperature stress. A total of 30 FADs were identified from a maize genome, including 13 soluble and 17 membrane-bound FADs, which were further classified into two and five sub-groups, respectively, via phylogenetic analysis. Although there is no evolutionary relationship between the soluble and the membrane-bound FADs, they all harbor a highly conserved FA_desaturase domain, and the types and the distributions of conserved motifs are similar within each sub-group. The transcriptome analysis revealed that genes encoding FADs exhibited different expression profiles under cold and heat stresses. The expression of ZmFAD2.1&2.2, ZmFAD7, and ZmSLD1&3 were significantly up-regulated under cold stress; moreover, the expression of ZmFAD2.1&2.3 and ZmSLD1&3 were obviously down-regulated under heat stress. The co-expression analysis demonstrated close correlation among the transcription factors and the significant responsive FAD genes under cold or heat stress. This study helps to understand the roles of plant FADs in temperature stress responses. |
format | Online Article Text |
id | pubmed-6627218 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-66272182019-07-23 Identification of Fatty Acid Desaturases in Maize and Their Differential Responses to Low and High Temperature Zhao, Xunchao Wei, Jinpeng He, Lin Zhang, Yifei Zhao, Ying Xu, Xiaoxuan Wei, Yulei Ge, Shengnan Ding, Dong Liu, Meng Gao, Shuren Xu, Jingyu Genes (Basel) Article Plant fatty acid desaturases (FADs) catalyze the desaturation of fatty acids in various forms and play important roles in regulating fatty acid composition and maintaining membrane fluidity under temperature stress. A total of 30 FADs were identified from a maize genome, including 13 soluble and 17 membrane-bound FADs, which were further classified into two and five sub-groups, respectively, via phylogenetic analysis. Although there is no evolutionary relationship between the soluble and the membrane-bound FADs, they all harbor a highly conserved FA_desaturase domain, and the types and the distributions of conserved motifs are similar within each sub-group. The transcriptome analysis revealed that genes encoding FADs exhibited different expression profiles under cold and heat stresses. The expression of ZmFAD2.1&2.2, ZmFAD7, and ZmSLD1&3 were significantly up-regulated under cold stress; moreover, the expression of ZmFAD2.1&2.3 and ZmSLD1&3 were obviously down-regulated under heat stress. The co-expression analysis demonstrated close correlation among the transcription factors and the significant responsive FAD genes under cold or heat stress. This study helps to understand the roles of plant FADs in temperature stress responses. MDPI 2019-06-12 /pmc/articles/PMC6627218/ /pubmed/31210171 http://dx.doi.org/10.3390/genes10060445 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Zhao, Xunchao Wei, Jinpeng He, Lin Zhang, Yifei Zhao, Ying Xu, Xiaoxuan Wei, Yulei Ge, Shengnan Ding, Dong Liu, Meng Gao, Shuren Xu, Jingyu Identification of Fatty Acid Desaturases in Maize and Their Differential Responses to Low and High Temperature |
title | Identification of Fatty Acid Desaturases in Maize and Their Differential Responses to Low and High Temperature |
title_full | Identification of Fatty Acid Desaturases in Maize and Their Differential Responses to Low and High Temperature |
title_fullStr | Identification of Fatty Acid Desaturases in Maize and Their Differential Responses to Low and High Temperature |
title_full_unstemmed | Identification of Fatty Acid Desaturases in Maize and Their Differential Responses to Low and High Temperature |
title_short | Identification of Fatty Acid Desaturases in Maize and Their Differential Responses to Low and High Temperature |
title_sort | identification of fatty acid desaturases in maize and their differential responses to low and high temperature |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6627218/ https://www.ncbi.nlm.nih.gov/pubmed/31210171 http://dx.doi.org/10.3390/genes10060445 |
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