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Experimental Approaches and Computational Modeling of Rat Serum Albumin and Its Interaction with Piperine
The bioactive piperine (1-piperoyl piperidine) compound found in some pepper species (Piper nigrum linn and Piper sarmentosum Roxb) has been shown to have therapeutic properties and to be useful for well-being. The tests used to validate these properties were performed in vitro or with small rats. H...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6627779/ https://www.ncbi.nlm.nih.gov/pubmed/31212743 http://dx.doi.org/10.3390/ijms20122856 |
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author | Zazeri, Gabriel Povinelli, Ana Paula Ribeiro Lima, Marcelo de Freitas Cornélio, Marinônio Lopes |
author_facet | Zazeri, Gabriel Povinelli, Ana Paula Ribeiro Lima, Marcelo de Freitas Cornélio, Marinônio Lopes |
author_sort | Zazeri, Gabriel |
collection | PubMed |
description | The bioactive piperine (1-piperoyl piperidine) compound found in some pepper species (Piper nigrum linn and Piper sarmentosum Roxb) has been shown to have therapeutic properties and to be useful for well-being. The tests used to validate these properties were performed in vitro or with small rats. However, in all these assays, the molecular approach was absent. Although the first therapeutic trials relied on the use of rats, no proposal was mentioned either experimentally or computationally at the molecular level regarding the interaction between piperine and rat serum albumin (RSA). In the present study, several spectroscopic techniques were employed to characterize rat serum albumin and, aided by computational techniques, the protein modeling was proposed. From the spectroscopic results, it was possible to estimate the binding constant (3.9 × 10(4) M(−1) at 288 K) using the Stern–Volmer model and the number of ligands (three) associated with the protein applying interaction density function model. The Gibbs free energy, an important thermodynamic parameter, was determined (−25 kJ/mol), indicating that the interaction was spontaneous. This important set of experimental results served to parameterize the computational simulations. The results of molecular docking and molecular dynamics matched appropriately made it possible to have detailed microenvironments of RSA accessed by piperine. |
format | Online Article Text |
id | pubmed-6627779 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-66277792019-07-23 Experimental Approaches and Computational Modeling of Rat Serum Albumin and Its Interaction with Piperine Zazeri, Gabriel Povinelli, Ana Paula Ribeiro Lima, Marcelo de Freitas Cornélio, Marinônio Lopes Int J Mol Sci Article The bioactive piperine (1-piperoyl piperidine) compound found in some pepper species (Piper nigrum linn and Piper sarmentosum Roxb) has been shown to have therapeutic properties and to be useful for well-being. The tests used to validate these properties were performed in vitro or with small rats. However, in all these assays, the molecular approach was absent. Although the first therapeutic trials relied on the use of rats, no proposal was mentioned either experimentally or computationally at the molecular level regarding the interaction between piperine and rat serum albumin (RSA). In the present study, several spectroscopic techniques were employed to characterize rat serum albumin and, aided by computational techniques, the protein modeling was proposed. From the spectroscopic results, it was possible to estimate the binding constant (3.9 × 10(4) M(−1) at 288 K) using the Stern–Volmer model and the number of ligands (three) associated with the protein applying interaction density function model. The Gibbs free energy, an important thermodynamic parameter, was determined (−25 kJ/mol), indicating that the interaction was spontaneous. This important set of experimental results served to parameterize the computational simulations. The results of molecular docking and molecular dynamics matched appropriately made it possible to have detailed microenvironments of RSA accessed by piperine. MDPI 2019-06-12 /pmc/articles/PMC6627779/ /pubmed/31212743 http://dx.doi.org/10.3390/ijms20122856 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Zazeri, Gabriel Povinelli, Ana Paula Ribeiro Lima, Marcelo de Freitas Cornélio, Marinônio Lopes Experimental Approaches and Computational Modeling of Rat Serum Albumin and Its Interaction with Piperine |
title | Experimental Approaches and Computational Modeling of Rat Serum Albumin and Its Interaction with Piperine |
title_full | Experimental Approaches and Computational Modeling of Rat Serum Albumin and Its Interaction with Piperine |
title_fullStr | Experimental Approaches and Computational Modeling of Rat Serum Albumin and Its Interaction with Piperine |
title_full_unstemmed | Experimental Approaches and Computational Modeling of Rat Serum Albumin and Its Interaction with Piperine |
title_short | Experimental Approaches and Computational Modeling of Rat Serum Albumin and Its Interaction with Piperine |
title_sort | experimental approaches and computational modeling of rat serum albumin and its interaction with piperine |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6627779/ https://www.ncbi.nlm.nih.gov/pubmed/31212743 http://dx.doi.org/10.3390/ijms20122856 |
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