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Structure and Activity of a Cytosolic Ribosome-Inactivating Protein from Rice

Ribosome-inactivating proteins (RIPs) are cytotoxic enzymes that inhibit protein translation by depurinating ribosomal RNA. Although most plant RIPs are synthesized with leader sequences that sequester them away from the host ribosomes, several RIPs from cereals lack these signal peptides and theref...

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Autores principales: De Zaeytijd, Jeroen, Rougé, Pierre, Smagghe, Guy, Van Damme, Els J.M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6628440/
https://www.ncbi.nlm.nih.gov/pubmed/31174339
http://dx.doi.org/10.3390/toxins11060325
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author De Zaeytijd, Jeroen
Rougé, Pierre
Smagghe, Guy
Van Damme, Els J.M.
author_facet De Zaeytijd, Jeroen
Rougé, Pierre
Smagghe, Guy
Van Damme, Els J.M.
author_sort De Zaeytijd, Jeroen
collection PubMed
description Ribosome-inactivating proteins (RIPs) are cytotoxic enzymes that inhibit protein translation by depurinating ribosomal RNA. Although most plant RIPs are synthesized with leader sequences that sequester them away from the host ribosomes, several RIPs from cereals lack these signal peptides and therefore probably reside in the cytosol near the plant ribosomes. More than 30 RIP genes have been identified in the rice (Oryza sativa spp. japonica) genome, many of them lacking a signal peptide. This paper focuses on a presumed cytosolic type-1 RIP from rice, referred to as OsRIP1. Using 3D modeling it is shown that OsRIP1 structurally resembles other cereal RIPs and has an active site that meets the requirements for activity. Furthermore, localization studies indicate that OsRIP1-eGFP fusion proteins reside in the nucleocytoplasmic space when expressed in epidermal cells of Nicotiana benthamiana or Arabidopsis thaliana suspension cells. Finally, OsRIP1 was recombinantly produced in Escherichia coli and was demonstrated to possess catalytic activity. Interestingly, this recombinant RIP inactivates wheat ribosomes far less efficiently than rabbit ribosomes in an in vitro system. These findings raise some interesting questions concerning the mode of action and physiological role of OsRIP1. This is the first time a RIP from rice is investigated at protein level and is shown to possess biological activity.
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spelling pubmed-66284402019-07-23 Structure and Activity of a Cytosolic Ribosome-Inactivating Protein from Rice De Zaeytijd, Jeroen Rougé, Pierre Smagghe, Guy Van Damme, Els J.M. Toxins (Basel) Article Ribosome-inactivating proteins (RIPs) are cytotoxic enzymes that inhibit protein translation by depurinating ribosomal RNA. Although most plant RIPs are synthesized with leader sequences that sequester them away from the host ribosomes, several RIPs from cereals lack these signal peptides and therefore probably reside in the cytosol near the plant ribosomes. More than 30 RIP genes have been identified in the rice (Oryza sativa spp. japonica) genome, many of them lacking a signal peptide. This paper focuses on a presumed cytosolic type-1 RIP from rice, referred to as OsRIP1. Using 3D modeling it is shown that OsRIP1 structurally resembles other cereal RIPs and has an active site that meets the requirements for activity. Furthermore, localization studies indicate that OsRIP1-eGFP fusion proteins reside in the nucleocytoplasmic space when expressed in epidermal cells of Nicotiana benthamiana or Arabidopsis thaliana suspension cells. Finally, OsRIP1 was recombinantly produced in Escherichia coli and was demonstrated to possess catalytic activity. Interestingly, this recombinant RIP inactivates wheat ribosomes far less efficiently than rabbit ribosomes in an in vitro system. These findings raise some interesting questions concerning the mode of action and physiological role of OsRIP1. This is the first time a RIP from rice is investigated at protein level and is shown to possess biological activity. MDPI 2019-06-06 /pmc/articles/PMC6628440/ /pubmed/31174339 http://dx.doi.org/10.3390/toxins11060325 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
De Zaeytijd, Jeroen
Rougé, Pierre
Smagghe, Guy
Van Damme, Els J.M.
Structure and Activity of a Cytosolic Ribosome-Inactivating Protein from Rice
title Structure and Activity of a Cytosolic Ribosome-Inactivating Protein from Rice
title_full Structure and Activity of a Cytosolic Ribosome-Inactivating Protein from Rice
title_fullStr Structure and Activity of a Cytosolic Ribosome-Inactivating Protein from Rice
title_full_unstemmed Structure and Activity of a Cytosolic Ribosome-Inactivating Protein from Rice
title_short Structure and Activity of a Cytosolic Ribosome-Inactivating Protein from Rice
title_sort structure and activity of a cytosolic ribosome-inactivating protein from rice
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6628440/
https://www.ncbi.nlm.nih.gov/pubmed/31174339
http://dx.doi.org/10.3390/toxins11060325
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