Cargando…

Consecutive seeding and transfer of genetic diversity in metastasis

During metastasis, only a fraction of genetic diversity in a primary tumor is passed on to metastases. We calculate this fraction of transferred diversity as a function of the seeding rate between tumors. At one extreme, if a metastasis is seeded by a single cell, then it inherits only the somatic m...

Descripción completa

Detalles Bibliográficos
Autores principales: Heyde, Alexander, Reiter, Johannes G., Naxerova, Kamila, Nowak, Martin A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: National Academy of Sciences 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6628640/
https://www.ncbi.nlm.nih.gov/pubmed/31239334
http://dx.doi.org/10.1073/pnas.1819408116
_version_ 1783435001879068672
author Heyde, Alexander
Reiter, Johannes G.
Naxerova, Kamila
Nowak, Martin A.
author_facet Heyde, Alexander
Reiter, Johannes G.
Naxerova, Kamila
Nowak, Martin A.
author_sort Heyde, Alexander
collection PubMed
description During metastasis, only a fraction of genetic diversity in a primary tumor is passed on to metastases. We calculate this fraction of transferred diversity as a function of the seeding rate between tumors. At one extreme, if a metastasis is seeded by a single cell, then it inherits only the somatic mutations present in the founding cell, so that none of the diversity in the primary tumor is transmitted to the metastasis. In contrast, if a metastasis is seeded by multiple cells, then some genetic diversity in the primary tumor can be transmitted. We study a multitype branching process of metastasis growth that originates from a single cell but over time receives additional cells. We derive a surprisingly simple formula that relates the expected diversity of a metastasis to the diversity in the pool of seeding cells. We calculate the probability that a metastasis is polyclonal. We apply our framework to published datasets for which polyclonality has been previously reported, analyzing 68 ovarian cancer samples, 31 breast cancer samples, and 8 colorectal cancer samples from 15 patients. For these clonally diverse metastases, under typical metastasis growth conditions, we find that 10 to 150 cells seeded each metastasis and left surviving lineages between initial formation and clinical detection.
format Online
Article
Text
id pubmed-6628640
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher National Academy of Sciences
record_format MEDLINE/PubMed
spelling pubmed-66286402019-07-22 Consecutive seeding and transfer of genetic diversity in metastasis Heyde, Alexander Reiter, Johannes G. Naxerova, Kamila Nowak, Martin A. Proc Natl Acad Sci U S A PNAS Plus During metastasis, only a fraction of genetic diversity in a primary tumor is passed on to metastases. We calculate this fraction of transferred diversity as a function of the seeding rate between tumors. At one extreme, if a metastasis is seeded by a single cell, then it inherits only the somatic mutations present in the founding cell, so that none of the diversity in the primary tumor is transmitted to the metastasis. In contrast, if a metastasis is seeded by multiple cells, then some genetic diversity in the primary tumor can be transmitted. We study a multitype branching process of metastasis growth that originates from a single cell but over time receives additional cells. We derive a surprisingly simple formula that relates the expected diversity of a metastasis to the diversity in the pool of seeding cells. We calculate the probability that a metastasis is polyclonal. We apply our framework to published datasets for which polyclonality has been previously reported, analyzing 68 ovarian cancer samples, 31 breast cancer samples, and 8 colorectal cancer samples from 15 patients. For these clonally diverse metastases, under typical metastasis growth conditions, we find that 10 to 150 cells seeded each metastasis and left surviving lineages between initial formation and clinical detection. National Academy of Sciences 2019-07-09 2019-06-25 /pmc/articles/PMC6628640/ /pubmed/31239334 http://dx.doi.org/10.1073/pnas.1819408116 Text en Copyright © 2019 the Author(s). Published by PNAS. http://creativecommons.org/licenses/by/4.0/ https://creativecommons.org/licenses/by/4.0/This open access article is distributed under Creative Commons Attribution License 4.0 (CC BY) (http://creativecommons.org/licenses/by/4.0/) .
spellingShingle PNAS Plus
Heyde, Alexander
Reiter, Johannes G.
Naxerova, Kamila
Nowak, Martin A.
Consecutive seeding and transfer of genetic diversity in metastasis
title Consecutive seeding and transfer of genetic diversity in metastasis
title_full Consecutive seeding and transfer of genetic diversity in metastasis
title_fullStr Consecutive seeding and transfer of genetic diversity in metastasis
title_full_unstemmed Consecutive seeding and transfer of genetic diversity in metastasis
title_short Consecutive seeding and transfer of genetic diversity in metastasis
title_sort consecutive seeding and transfer of genetic diversity in metastasis
topic PNAS Plus
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6628640/
https://www.ncbi.nlm.nih.gov/pubmed/31239334
http://dx.doi.org/10.1073/pnas.1819408116
work_keys_str_mv AT heydealexander consecutiveseedingandtransferofgeneticdiversityinmetastasis
AT reiterjohannesg consecutiveseedingandtransferofgeneticdiversityinmetastasis
AT naxerovakamila consecutiveseedingandtransferofgeneticdiversityinmetastasis
AT nowakmartina consecutiveseedingandtransferofgeneticdiversityinmetastasis