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B7-CD28 gene family expression is associated with prognostic and immunological characteristics of diffuse large B-cell lymphoma

The B7-CD28 gene family plays a key role in regulating cellular immunity and is closely related to tumorigenesis and immune evasion. Here, we explored associations between clinical and immune features and B7-CD28 gene family expression in Gene Expression Omnibus (GEO) datasets representing 1812 diff...

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Autores principales: Wang, Gangjian, Fu, Xiaorui, Chang, Yu, Li, Xin, Wu, Xiaolong, Li, Ling, Zhang, Lei, Sun, Zhenchang, Zhang, Xudong, Zhang, Mingzhi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6629000/
https://www.ncbi.nlm.nih.gov/pubmed/31195368
http://dx.doi.org/10.18632/aging.102025
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author Wang, Gangjian
Fu, Xiaorui
Chang, Yu
Li, Xin
Wu, Xiaolong
Li, Ling
Zhang, Lei
Sun, Zhenchang
Zhang, Xudong
Zhang, Mingzhi
author_facet Wang, Gangjian
Fu, Xiaorui
Chang, Yu
Li, Xin
Wu, Xiaolong
Li, Ling
Zhang, Lei
Sun, Zhenchang
Zhang, Xudong
Zhang, Mingzhi
author_sort Wang, Gangjian
collection PubMed
description The B7-CD28 gene family plays a key role in regulating cellular immunity and is closely related to tumorigenesis and immune evasion. Here, we explored associations between clinical and immune features and B7-CD28 gene family expression in Gene Expression Omnibus (GEO) datasets representing 1812 diffuse large B-cell lymphoma (DLBCL) patients. This included 414 in the GSE10846 training cohort and 470 and 928 patients in the GSE31312 and GSE117556 validation cohorts, respectively. Four survival-associated genes identified in the GSE10846 cohort by univariate Cox analysis were incorporated into a multivariate analysis, ultimately establishing a three-gene risk signature. Risk scores assigned based on expression of these genes were validated by Kaplan–Meier and multivariable Cox analyses in the remaining datasets and in important clinical subsets. High-risk patients had shorter overall survival and, in some cases, progression-free survival than low-risk patients. Additionally, expression of programmed cell death 1 (PD-1) and programmed death ligand 1 (PD-L1), as well as several other important immune checkpoint genes, differed between high-risk and low-risk patients, as did the proportions of various immune-infiltrating cells. Finally, further analysis confirmed that these B7-CD28 genes play important roles in immune responses altered in DLBCL.
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spelling pubmed-66290002019-07-18 B7-CD28 gene family expression is associated with prognostic and immunological characteristics of diffuse large B-cell lymphoma Wang, Gangjian Fu, Xiaorui Chang, Yu Li, Xin Wu, Xiaolong Li, Ling Zhang, Lei Sun, Zhenchang Zhang, Xudong Zhang, Mingzhi Aging (Albany NY) Research Paper The B7-CD28 gene family plays a key role in regulating cellular immunity and is closely related to tumorigenesis and immune evasion. Here, we explored associations between clinical and immune features and B7-CD28 gene family expression in Gene Expression Omnibus (GEO) datasets representing 1812 diffuse large B-cell lymphoma (DLBCL) patients. This included 414 in the GSE10846 training cohort and 470 and 928 patients in the GSE31312 and GSE117556 validation cohorts, respectively. Four survival-associated genes identified in the GSE10846 cohort by univariate Cox analysis were incorporated into a multivariate analysis, ultimately establishing a three-gene risk signature. Risk scores assigned based on expression of these genes were validated by Kaplan–Meier and multivariable Cox analyses in the remaining datasets and in important clinical subsets. High-risk patients had shorter overall survival and, in some cases, progression-free survival than low-risk patients. Additionally, expression of programmed cell death 1 (PD-1) and programmed death ligand 1 (PD-L1), as well as several other important immune checkpoint genes, differed between high-risk and low-risk patients, as did the proportions of various immune-infiltrating cells. Finally, further analysis confirmed that these B7-CD28 genes play important roles in immune responses altered in DLBCL. Impact Journals 2019-06-13 /pmc/articles/PMC6629000/ /pubmed/31195368 http://dx.doi.org/10.18632/aging.102025 Text en Copyright © 2019 Wu et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC BY) 3.0 License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Paper
Wang, Gangjian
Fu, Xiaorui
Chang, Yu
Li, Xin
Wu, Xiaolong
Li, Ling
Zhang, Lei
Sun, Zhenchang
Zhang, Xudong
Zhang, Mingzhi
B7-CD28 gene family expression is associated with prognostic and immunological characteristics of diffuse large B-cell lymphoma
title B7-CD28 gene family expression is associated with prognostic and immunological characteristics of diffuse large B-cell lymphoma
title_full B7-CD28 gene family expression is associated with prognostic and immunological characteristics of diffuse large B-cell lymphoma
title_fullStr B7-CD28 gene family expression is associated with prognostic and immunological characteristics of diffuse large B-cell lymphoma
title_full_unstemmed B7-CD28 gene family expression is associated with prognostic and immunological characteristics of diffuse large B-cell lymphoma
title_short B7-CD28 gene family expression is associated with prognostic and immunological characteristics of diffuse large B-cell lymphoma
title_sort b7-cd28 gene family expression is associated with prognostic and immunological characteristics of diffuse large b-cell lymphoma
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6629000/
https://www.ncbi.nlm.nih.gov/pubmed/31195368
http://dx.doi.org/10.18632/aging.102025
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