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B7-CD28 gene family expression is associated with prognostic and immunological characteristics of diffuse large B-cell lymphoma
The B7-CD28 gene family plays a key role in regulating cellular immunity and is closely related to tumorigenesis and immune evasion. Here, we explored associations between clinical and immune features and B7-CD28 gene family expression in Gene Expression Omnibus (GEO) datasets representing 1812 diff...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6629000/ https://www.ncbi.nlm.nih.gov/pubmed/31195368 http://dx.doi.org/10.18632/aging.102025 |
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author | Wang, Gangjian Fu, Xiaorui Chang, Yu Li, Xin Wu, Xiaolong Li, Ling Zhang, Lei Sun, Zhenchang Zhang, Xudong Zhang, Mingzhi |
author_facet | Wang, Gangjian Fu, Xiaorui Chang, Yu Li, Xin Wu, Xiaolong Li, Ling Zhang, Lei Sun, Zhenchang Zhang, Xudong Zhang, Mingzhi |
author_sort | Wang, Gangjian |
collection | PubMed |
description | The B7-CD28 gene family plays a key role in regulating cellular immunity and is closely related to tumorigenesis and immune evasion. Here, we explored associations between clinical and immune features and B7-CD28 gene family expression in Gene Expression Omnibus (GEO) datasets representing 1812 diffuse large B-cell lymphoma (DLBCL) patients. This included 414 in the GSE10846 training cohort and 470 and 928 patients in the GSE31312 and GSE117556 validation cohorts, respectively. Four survival-associated genes identified in the GSE10846 cohort by univariate Cox analysis were incorporated into a multivariate analysis, ultimately establishing a three-gene risk signature. Risk scores assigned based on expression of these genes were validated by Kaplan–Meier and multivariable Cox analyses in the remaining datasets and in important clinical subsets. High-risk patients had shorter overall survival and, in some cases, progression-free survival than low-risk patients. Additionally, expression of programmed cell death 1 (PD-1) and programmed death ligand 1 (PD-L1), as well as several other important immune checkpoint genes, differed between high-risk and low-risk patients, as did the proportions of various immune-infiltrating cells. Finally, further analysis confirmed that these B7-CD28 genes play important roles in immune responses altered in DLBCL. |
format | Online Article Text |
id | pubmed-6629000 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-66290002019-07-18 B7-CD28 gene family expression is associated with prognostic and immunological characteristics of diffuse large B-cell lymphoma Wang, Gangjian Fu, Xiaorui Chang, Yu Li, Xin Wu, Xiaolong Li, Ling Zhang, Lei Sun, Zhenchang Zhang, Xudong Zhang, Mingzhi Aging (Albany NY) Research Paper The B7-CD28 gene family plays a key role in regulating cellular immunity and is closely related to tumorigenesis and immune evasion. Here, we explored associations between clinical and immune features and B7-CD28 gene family expression in Gene Expression Omnibus (GEO) datasets representing 1812 diffuse large B-cell lymphoma (DLBCL) patients. This included 414 in the GSE10846 training cohort and 470 and 928 patients in the GSE31312 and GSE117556 validation cohorts, respectively. Four survival-associated genes identified in the GSE10846 cohort by univariate Cox analysis were incorporated into a multivariate analysis, ultimately establishing a three-gene risk signature. Risk scores assigned based on expression of these genes were validated by Kaplan–Meier and multivariable Cox analyses in the remaining datasets and in important clinical subsets. High-risk patients had shorter overall survival and, in some cases, progression-free survival than low-risk patients. Additionally, expression of programmed cell death 1 (PD-1) and programmed death ligand 1 (PD-L1), as well as several other important immune checkpoint genes, differed between high-risk and low-risk patients, as did the proportions of various immune-infiltrating cells. Finally, further analysis confirmed that these B7-CD28 genes play important roles in immune responses altered in DLBCL. Impact Journals 2019-06-13 /pmc/articles/PMC6629000/ /pubmed/31195368 http://dx.doi.org/10.18632/aging.102025 Text en Copyright © 2019 Wu et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC BY) 3.0 License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Paper Wang, Gangjian Fu, Xiaorui Chang, Yu Li, Xin Wu, Xiaolong Li, Ling Zhang, Lei Sun, Zhenchang Zhang, Xudong Zhang, Mingzhi B7-CD28 gene family expression is associated with prognostic and immunological characteristics of diffuse large B-cell lymphoma |
title | B7-CD28 gene family expression is associated with prognostic and immunological characteristics of diffuse large B-cell lymphoma |
title_full | B7-CD28 gene family expression is associated with prognostic and immunological characteristics of diffuse large B-cell lymphoma |
title_fullStr | B7-CD28 gene family expression is associated with prognostic and immunological characteristics of diffuse large B-cell lymphoma |
title_full_unstemmed | B7-CD28 gene family expression is associated with prognostic and immunological characteristics of diffuse large B-cell lymphoma |
title_short | B7-CD28 gene family expression is associated with prognostic and immunological characteristics of diffuse large B-cell lymphoma |
title_sort | b7-cd28 gene family expression is associated with prognostic and immunological characteristics of diffuse large b-cell lymphoma |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6629000/ https://www.ncbi.nlm.nih.gov/pubmed/31195368 http://dx.doi.org/10.18632/aging.102025 |
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