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Response of Fungal Communities and Co-occurrence Network Patterns to Compost Amendment in Black Soil of Northeast China

In agroecosystems, fungi not only attract attention as crop pathogens, but also play crucial roles in nutrient cycling as decomposers and arbuscular mycorrhizal mutualists. Consequently soil fungi strongly influence agroecosystem function, and are conspicuously influenced by agricultural practices....

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Autores principales: Yang, Wei, Jing, Xuyuan, Guan, Yupeng, Zhai, Cheng, Wang, Tao, Shi, Dengyu, Sun, Wenpeng, Gu, Siyu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6629936/
https://www.ncbi.nlm.nih.gov/pubmed/31354663
http://dx.doi.org/10.3389/fmicb.2019.01562
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author Yang, Wei
Jing, Xuyuan
Guan, Yupeng
Zhai, Cheng
Wang, Tao
Shi, Dengyu
Sun, Wenpeng
Gu, Siyu
author_facet Yang, Wei
Jing, Xuyuan
Guan, Yupeng
Zhai, Cheng
Wang, Tao
Shi, Dengyu
Sun, Wenpeng
Gu, Siyu
author_sort Yang, Wei
collection PubMed
description In agroecosystems, fungi not only attract attention as crop pathogens, but also play crucial roles in nutrient cycling as decomposers and arbuscular mycorrhizal mutualists. Consequently soil fungi strongly influence agroecosystem function, and are conspicuously influenced by agricultural practices. We examined the effects of four compost rates (0, 11.25, 22.5, and 45 Mg ha(−1)) on soil fungal community compositions and network patterns in soybean at seedling, flowering, and mature stage in a field experiment in black soil of Northeast China. Miseq sequencing was used to characterize the soil fungal community. Our results revealed that soil fungal richness was unaffected by compost addition, while soil fungal community composition was significantly influenced by compost addition across the growing season. Among the combined “top 20” fungal OTUs, 15 OTUs positively responded to compost addition, while 10 negatively responded. The abundance of predicted pathotroph was greatly decreased by the 45 Mg ha(−1) compost addition. Network analysis indicated that the fungal networks in compost amended soils were more complex and harbored more positive links than the control. Fungal network harbored more positive links among saprotroph-saprotroph and saprotroph-symbiotroph in moderate level of compost amended soils than other networks. In conclusion, this study revealed that compost addition impacted positively both the soil fungal communities and network patterns within a single growing season. Thus, compost addition could be a good practice to enhance the soil fungal community and function and ultimately soil health and quality.
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spelling pubmed-66299362019-07-26 Response of Fungal Communities and Co-occurrence Network Patterns to Compost Amendment in Black Soil of Northeast China Yang, Wei Jing, Xuyuan Guan, Yupeng Zhai, Cheng Wang, Tao Shi, Dengyu Sun, Wenpeng Gu, Siyu Front Microbiol Microbiology In agroecosystems, fungi not only attract attention as crop pathogens, but also play crucial roles in nutrient cycling as decomposers and arbuscular mycorrhizal mutualists. Consequently soil fungi strongly influence agroecosystem function, and are conspicuously influenced by agricultural practices. We examined the effects of four compost rates (0, 11.25, 22.5, and 45 Mg ha(−1)) on soil fungal community compositions and network patterns in soybean at seedling, flowering, and mature stage in a field experiment in black soil of Northeast China. Miseq sequencing was used to characterize the soil fungal community. Our results revealed that soil fungal richness was unaffected by compost addition, while soil fungal community composition was significantly influenced by compost addition across the growing season. Among the combined “top 20” fungal OTUs, 15 OTUs positively responded to compost addition, while 10 negatively responded. The abundance of predicted pathotroph was greatly decreased by the 45 Mg ha(−1) compost addition. Network analysis indicated that the fungal networks in compost amended soils were more complex and harbored more positive links than the control. Fungal network harbored more positive links among saprotroph-saprotroph and saprotroph-symbiotroph in moderate level of compost amended soils than other networks. In conclusion, this study revealed that compost addition impacted positively both the soil fungal communities and network patterns within a single growing season. Thus, compost addition could be a good practice to enhance the soil fungal community and function and ultimately soil health and quality. Frontiers Media S.A. 2019-07-09 /pmc/articles/PMC6629936/ /pubmed/31354663 http://dx.doi.org/10.3389/fmicb.2019.01562 Text en Copyright © 2019 Yang, Jing, Guan, Zhai, Wang, Shi, Sun and Gu. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Yang, Wei
Jing, Xuyuan
Guan, Yupeng
Zhai, Cheng
Wang, Tao
Shi, Dengyu
Sun, Wenpeng
Gu, Siyu
Response of Fungal Communities and Co-occurrence Network Patterns to Compost Amendment in Black Soil of Northeast China
title Response of Fungal Communities and Co-occurrence Network Patterns to Compost Amendment in Black Soil of Northeast China
title_full Response of Fungal Communities and Co-occurrence Network Patterns to Compost Amendment in Black Soil of Northeast China
title_fullStr Response of Fungal Communities and Co-occurrence Network Patterns to Compost Amendment in Black Soil of Northeast China
title_full_unstemmed Response of Fungal Communities and Co-occurrence Network Patterns to Compost Amendment in Black Soil of Northeast China
title_short Response of Fungal Communities and Co-occurrence Network Patterns to Compost Amendment in Black Soil of Northeast China
title_sort response of fungal communities and co-occurrence network patterns to compost amendment in black soil of northeast china
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6629936/
https://www.ncbi.nlm.nih.gov/pubmed/31354663
http://dx.doi.org/10.3389/fmicb.2019.01562
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