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Euglena Central Metabolic Pathways and Their Subcellular Locations

Euglenids are a group of algae of great interest for biotechnology, with a large and complex metabolic capability. To study the metabolic network, it is necessary to know where the component enzymes are in the cell, but despite a long history of research into Euglena, the subcellular locations of ma...

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Autores principales: Inwongwan, Sahutchai, Kruger, Nicholas J., Ratcliffe, R. George, O’Neill, Ellis C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6630311/
https://www.ncbi.nlm.nih.gov/pubmed/31207935
http://dx.doi.org/10.3390/metabo9060115
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author Inwongwan, Sahutchai
Kruger, Nicholas J.
Ratcliffe, R. George
O’Neill, Ellis C.
author_facet Inwongwan, Sahutchai
Kruger, Nicholas J.
Ratcliffe, R. George
O’Neill, Ellis C.
author_sort Inwongwan, Sahutchai
collection PubMed
description Euglenids are a group of algae of great interest for biotechnology, with a large and complex metabolic capability. To study the metabolic network, it is necessary to know where the component enzymes are in the cell, but despite a long history of research into Euglena, the subcellular locations of many major pathways are only poorly defined. Euglena is phylogenetically distant from other commonly studied algae, they have secondary plastids bounded by three membranes, and they can survive after destruction of their plastids. These unusual features make it difficult to assume that the subcellular organization of the metabolic network will be equivalent to that of other photosynthetic organisms. We analysed bioinformatic, biochemical, and proteomic information from a variety of sources to assess the subcellular location of the enzymes of the central metabolic pathways, and we use these assignments to propose a model of the metabolic network of Euglena. Other than photosynthesis, all major pathways present in the chloroplast are also present elsewhere in the cell. Our model demonstrates how Euglena can synthesise all the metabolites required for growth from simple carbon inputs, and can survive in the absence of chloroplasts.
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spelling pubmed-66303112019-08-19 Euglena Central Metabolic Pathways and Their Subcellular Locations Inwongwan, Sahutchai Kruger, Nicholas J. Ratcliffe, R. George O’Neill, Ellis C. Metabolites Article Euglenids are a group of algae of great interest for biotechnology, with a large and complex metabolic capability. To study the metabolic network, it is necessary to know where the component enzymes are in the cell, but despite a long history of research into Euglena, the subcellular locations of many major pathways are only poorly defined. Euglena is phylogenetically distant from other commonly studied algae, they have secondary plastids bounded by three membranes, and they can survive after destruction of their plastids. These unusual features make it difficult to assume that the subcellular organization of the metabolic network will be equivalent to that of other photosynthetic organisms. We analysed bioinformatic, biochemical, and proteomic information from a variety of sources to assess the subcellular location of the enzymes of the central metabolic pathways, and we use these assignments to propose a model of the metabolic network of Euglena. Other than photosynthesis, all major pathways present in the chloroplast are also present elsewhere in the cell. Our model demonstrates how Euglena can synthesise all the metabolites required for growth from simple carbon inputs, and can survive in the absence of chloroplasts. MDPI 2019-06-14 /pmc/articles/PMC6630311/ /pubmed/31207935 http://dx.doi.org/10.3390/metabo9060115 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Inwongwan, Sahutchai
Kruger, Nicholas J.
Ratcliffe, R. George
O’Neill, Ellis C.
Euglena Central Metabolic Pathways and Their Subcellular Locations
title Euglena Central Metabolic Pathways and Their Subcellular Locations
title_full Euglena Central Metabolic Pathways and Their Subcellular Locations
title_fullStr Euglena Central Metabolic Pathways and Their Subcellular Locations
title_full_unstemmed Euglena Central Metabolic Pathways and Their Subcellular Locations
title_short Euglena Central Metabolic Pathways and Their Subcellular Locations
title_sort euglena central metabolic pathways and their subcellular locations
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6630311/
https://www.ncbi.nlm.nih.gov/pubmed/31207935
http://dx.doi.org/10.3390/metabo9060115
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