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Emerging Technologies in Mass Spectrometry-Based DNA Adductomics
The measurement of DNA adducts, the covalent modifications of DNA upon the exposure to the environmental and dietary genotoxicants and endogenously produced electrophiles, provides molecular evidence for DNA damage. With the recent improvements in the sensitivity and scanning speed of mass spectrome...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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MDPI
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6630665/ https://www.ncbi.nlm.nih.gov/pubmed/31091740 http://dx.doi.org/10.3390/ht8020013 |
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author | Guo, Jingshu Turesky, Robert J. |
author_facet | Guo, Jingshu Turesky, Robert J. |
author_sort | Guo, Jingshu |
collection | PubMed |
description | The measurement of DNA adducts, the covalent modifications of DNA upon the exposure to the environmental and dietary genotoxicants and endogenously produced electrophiles, provides molecular evidence for DNA damage. With the recent improvements in the sensitivity and scanning speed of mass spectrometry (MS) instrumentation, particularly high-resolution MS, it is now feasible to screen for the totality of DNA damage in the human genome through DNA adductomics approaches. Several MS platforms have been used in DNA adductomic analysis, each of which has its strengths and limitations. The loss of 2′-deoxyribose from the modified nucleoside upon collision-induced dissociation is the main transition feature utilized in the screening of DNA adducts. Several advanced data-dependent and data-independent scanning techniques originated from proteomics and metabolomics have been tailored for DNA adductomics. The field of DNA adductomics is an emerging technology in human exposure assessment. As the analytical technology matures and bioinformatics tools become available for analysis of the MS data, DNA adductomics can advance our understanding about the role of chemical exposures in DNA damage and disease risk. |
format | Online Article Text |
id | pubmed-6630665 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-66306652019-08-19 Emerging Technologies in Mass Spectrometry-Based DNA Adductomics Guo, Jingshu Turesky, Robert J. High Throughput Review The measurement of DNA adducts, the covalent modifications of DNA upon the exposure to the environmental and dietary genotoxicants and endogenously produced electrophiles, provides molecular evidence for DNA damage. With the recent improvements in the sensitivity and scanning speed of mass spectrometry (MS) instrumentation, particularly high-resolution MS, it is now feasible to screen for the totality of DNA damage in the human genome through DNA adductomics approaches. Several MS platforms have been used in DNA adductomic analysis, each of which has its strengths and limitations. The loss of 2′-deoxyribose from the modified nucleoside upon collision-induced dissociation is the main transition feature utilized in the screening of DNA adducts. Several advanced data-dependent and data-independent scanning techniques originated from proteomics and metabolomics have been tailored for DNA adductomics. The field of DNA adductomics is an emerging technology in human exposure assessment. As the analytical technology matures and bioinformatics tools become available for analysis of the MS data, DNA adductomics can advance our understanding about the role of chemical exposures in DNA damage and disease risk. MDPI 2019-05-14 /pmc/articles/PMC6630665/ /pubmed/31091740 http://dx.doi.org/10.3390/ht8020013 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Review Guo, Jingshu Turesky, Robert J. Emerging Technologies in Mass Spectrometry-Based DNA Adductomics |
title | Emerging Technologies in Mass Spectrometry-Based DNA Adductomics |
title_full | Emerging Technologies in Mass Spectrometry-Based DNA Adductomics |
title_fullStr | Emerging Technologies in Mass Spectrometry-Based DNA Adductomics |
title_full_unstemmed | Emerging Technologies in Mass Spectrometry-Based DNA Adductomics |
title_short | Emerging Technologies in Mass Spectrometry-Based DNA Adductomics |
title_sort | emerging technologies in mass spectrometry-based dna adductomics |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6630665/ https://www.ncbi.nlm.nih.gov/pubmed/31091740 http://dx.doi.org/10.3390/ht8020013 |
work_keys_str_mv | AT guojingshu emergingtechnologiesinmassspectrometrybaseddnaadductomics AT tureskyrobertj emergingtechnologiesinmassspectrometrybaseddnaadductomics |