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Cell-Free Synthetic Biology Platform for Engineering Synthetic Biological Circuits and Systems

Synthetic biology integrates diverse engineering disciplines to create novel biological systems for biomedical and technological applications. The substantial growth of the synthetic biology field in the past decade is poised to transform biotechnology and medicine. To streamline design processes an...

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Autores principales: Jeong, Dohyun, Klocke, Melissa, Agarwal, Siddharth, Kim, Jeongwon, Choi, Seungdo, Franco, Elisa, Kim, Jongmin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6632179/
https://www.ncbi.nlm.nih.gov/pubmed/31164618
http://dx.doi.org/10.3390/mps2020039
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author Jeong, Dohyun
Klocke, Melissa
Agarwal, Siddharth
Kim, Jeongwon
Choi, Seungdo
Franco, Elisa
Kim, Jongmin
author_facet Jeong, Dohyun
Klocke, Melissa
Agarwal, Siddharth
Kim, Jeongwon
Choi, Seungdo
Franco, Elisa
Kim, Jongmin
author_sort Jeong, Dohyun
collection PubMed
description Synthetic biology integrates diverse engineering disciplines to create novel biological systems for biomedical and technological applications. The substantial growth of the synthetic biology field in the past decade is poised to transform biotechnology and medicine. To streamline design processes and facilitate debugging of complex synthetic circuits, cell-free synthetic biology approaches has reached broad research communities both in academia and industry. By recapitulating gene expression systems in vitro, cell-free expression systems offer flexibility to explore beyond the confines of living cells and allow networking of synthetic and natural systems. Here, we review the capabilities of the current cell-free platforms, focusing on nucleic acid-based molecular programs and circuit construction. We survey the recent developments including cell-free transcription–translation platforms, DNA nanostructures and circuits, and novel classes of riboregulators. The links to mathematical models and the prospects of cell-free synthetic biology platforms will also be discussed.
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spelling pubmed-66321792019-08-19 Cell-Free Synthetic Biology Platform for Engineering Synthetic Biological Circuits and Systems Jeong, Dohyun Klocke, Melissa Agarwal, Siddharth Kim, Jeongwon Choi, Seungdo Franco, Elisa Kim, Jongmin Methods Protoc Review Synthetic biology integrates diverse engineering disciplines to create novel biological systems for biomedical and technological applications. The substantial growth of the synthetic biology field in the past decade is poised to transform biotechnology and medicine. To streamline design processes and facilitate debugging of complex synthetic circuits, cell-free synthetic biology approaches has reached broad research communities both in academia and industry. By recapitulating gene expression systems in vitro, cell-free expression systems offer flexibility to explore beyond the confines of living cells and allow networking of synthetic and natural systems. Here, we review the capabilities of the current cell-free platforms, focusing on nucleic acid-based molecular programs and circuit construction. We survey the recent developments including cell-free transcription–translation platforms, DNA nanostructures and circuits, and novel classes of riboregulators. The links to mathematical models and the prospects of cell-free synthetic biology platforms will also be discussed. MDPI 2019-05-14 /pmc/articles/PMC6632179/ /pubmed/31164618 http://dx.doi.org/10.3390/mps2020039 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Jeong, Dohyun
Klocke, Melissa
Agarwal, Siddharth
Kim, Jeongwon
Choi, Seungdo
Franco, Elisa
Kim, Jongmin
Cell-Free Synthetic Biology Platform for Engineering Synthetic Biological Circuits and Systems
title Cell-Free Synthetic Biology Platform for Engineering Synthetic Biological Circuits and Systems
title_full Cell-Free Synthetic Biology Platform for Engineering Synthetic Biological Circuits and Systems
title_fullStr Cell-Free Synthetic Biology Platform for Engineering Synthetic Biological Circuits and Systems
title_full_unstemmed Cell-Free Synthetic Biology Platform for Engineering Synthetic Biological Circuits and Systems
title_short Cell-Free Synthetic Biology Platform for Engineering Synthetic Biological Circuits and Systems
title_sort cell-free synthetic biology platform for engineering synthetic biological circuits and systems
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6632179/
https://www.ncbi.nlm.nih.gov/pubmed/31164618
http://dx.doi.org/10.3390/mps2020039
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