Cargando…
Crunch: integrated processing and modeling of ChIP-seq data in terms of regulatory motifs
Although ChIP-seq has become a routine experimental approach for quantitatively characterizing the genome-wide binding of transcription factors (TFs), computational analysis procedures remain far from standardized, making it difficult to compare ChIP-seq results across experiments. In addition, alth...
Autores principales: | Berger, Severin, Pachkov, Mikhail, Arnold, Phil, Omidi, Saeed, Kelley, Nicholas, Salatino, Silvia, van Nimwegen, Erik |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cold Spring Harbor Laboratory Press
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6633267/ https://www.ncbi.nlm.nih.gov/pubmed/31138617 http://dx.doi.org/10.1101/gr.239319.118 |
Ejemplares similares
-
MM-ChIP enables integrative analysis of cross-platform and between-laboratory ChIP-chip or ChIP-seq data
por: Chen, Yiwen, et al.
Publicado: (2011) -
A highly efficient and effective motif discovery method for ChIP-seq/ChIP-chip data using positional information
por: Ma, Xiaotu, et al.
Publicado: (2012) -
RSAT peak-motifs: motif analysis in full-size ChIP-seq datasets
por: Thomas-Chollier, Morgane, et al.
Publicado: (2012) -
De novo ChIP-seq analysis
por: He, Xin, et al.
Publicado: (2015) -
HyperChIP: identification of hypervariable signals across ChIP-seq or ATAC-seq samples
por: Chen, Haojie, et al.
Publicado: (2022)