Cargando…
OMA standalone: orthology inference among public and custom genomes and transcriptomes
Genomes and transcriptomes are now typically sequenced by individual laboratories but analyzing them often remains challenging. One essential step in many analyses lies in identifying orthologs—corresponding genes across multiple species—but this is far from trivial. The Orthologous MAtrix (OMA) dat...
Autores principales: | Altenhoff, Adrian M., Levy, Jeremy, Zarowiecki, Magdalena, Tomiczek, Bartłomiej, Warwick Vesztrocy, Alex, Dalquen, Daniel A., Müller, Steven, Telford, Maximilian J., Glover, Natasha M., Dylus, David, Dessimoz, Christophe |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cold Spring Harbor Laboratory Press
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6633268/ https://www.ncbi.nlm.nih.gov/pubmed/31235654 http://dx.doi.org/10.1101/gr.243212.118 |
Ejemplares similares
-
Expanding the Orthologous Matrix (OMA) programmatic interfaces: REST API and the
OmaDB packages for R and Python
por: Kaleb, Klara, et al.
Publicado: (2019) -
How to build phylogenetic species trees with OMA
por: Dylus, David, et al.
Publicado: (2022) -
The OMA orthology database in 2018: retrieving evolutionary relationships among all domains of life through richer web and programmatic interfaces
por: Altenhoff, Adrian M, et al.
Publicado: (2018) -
OMA 2011: orthology inference among 1000 complete genomes
por: Altenhoff, Adrian M., et al.
Publicado: (2011) -
Orthologous Matrix (OMA) algorithm 2.0: more robust to asymmetric evolutionary rates and more scalable hierarchical orthologous group inference
por: Train, Clément-Marie, et al.
Publicado: (2017)