Cargando…

Investigating colistin drug resistance: The role of high-throughput sequencing and bioinformatics

Bacterial infections involving antibiotic-resistant gram-negative bacteria continue to increase and represent a major global public health concern. Resistance to antibiotics in these bacteria is mediated by chromosomal and/or acquired resistance mechanisms, these give rise to multi-drug resistant (M...

Descripción completa

Detalles Bibliográficos
Autores principales:	Aruhomukama, Dickson, Sserwadda, Ivan, Mboowa, Gerald
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	F1000 Research Limited 2019
Materias:	Review
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6635981/ https://www.ncbi.nlm.nih.gov/pubmed/31354944 http://dx.doi.org/10.12688/f1000research.18081.2

Ejemplares similares

Human Genomic Loci Important in Common Infectious Diseases: Role of High-Throughput Sequencing and Genome-Wide Association Studies
por: Mboowa, Gerald, et al.
Publicado: (2018)

Role of genomics literacy in reducing the burden of common genetic diseases in Africa
por: Mboowa, Gerald, et al.
Publicado: (2019)

rMAP: the Rapid Microbial Analysis Pipeline for ESKAPE bacterial group whole-genome sequence data
por: Sserwadda, Ivan, et al.
Publicado: (2021)

bla(VIM)- and bla(OXA)-mediated carbapenem resistance among Acinetobacter baumannii and Pseudomonas aeruginosa isolates from the Mulago hospital intensive care unit in Kampala, Uganda
por: Aruhomukama, Dickson, et al.
Publicado: (2019)

Face-Masking, an Acceptable Protective Measure against COVID-19 in Ugandan High-Risk Groups
por: Mboowa, Gerald, et al.
Publicado: (2021)

Increasing Antimicrobial Resistance in Surgical Wards at Mulago National Referral Hospital, Uganda, from 2014 to 2018—Cause for Concern?
por: Mboowa, Gerald, et al.
Publicado: (2021)

Gastrointestinal Tract Colonization Rate of Extended-Spectrum Beta-Lactamase-Producing Gram-Negative Bacteria and Associated Factors Among Orthopaedic Patients in a Tertiary Hospital in Tanzania: Implications for Infection Prevention
por: Seni, Jeremiah, et al.
Publicado: (2021)

Efficacy of Face Masks Used in Uganda: A Laboratory-Based Inquiry during the COVID-19 Pandemic
por: Mboowa, Gerald, et al.
Publicado: (2021)

Bioinformatics mentorship in a resource limited setting
por: Jjingo, Daudi, et al.
Publicado: (2021)

Investigating the evolution and predicting the future outlook of antimicrobial resistance in sub-saharan Africa using phenotypic data for Klebsiella pneumoniae: a 12-year analysis
por: Aruhomukama, Dickson, et al.
Publicado: (2023)

Microbial contaminants isolated from items and work surfaces in the post- operative ward at Kawolo general hospital, Uganda
por: Sserwadda, Ivan, et al.
Publicado: (2018)

Impact of high human genetic diversity in Africa on immunogenicity and efficacy of RTS,S/AS01 vaccine
por: Tukwasibwe, Stephen, et al.
Publicado: (2023)

Colistin Resistance and Management of Drug Resistant Infections
por: Sharma, Juhi, et al.
Publicado: (2022)

Reviewing the journey to the clinical application of bacteriophages to treat multi-drug-resistant bacteria
por: Mboowa, Gerald
Publicado: (2023)

An overview of colistin resistance, mobilized colistin resistance genes dissemination, global responses, and the alternatives to colistin: A review
por: Gharaibeh, Mohammad H., et al.
Publicado: (2019)

Review of phenotypic assays for detection of extended-spectrum β-lactamases and carbapenemases: a microbiology laboratory bench guide
por: Aruhomukama, Dickson
Publicado: (2020)

Colistin Resistance in Aeromonas spp.
por: Gonzalez-Avila, Luis Uriel, et al.
Publicado: (2021)

Unraveling virulence determinants in extended-spectrum beta-lactamase-producing Escherichia coli from East Africa using whole-genome sequencing
por: Sserwadda, Ivan, et al.
Publicado: (2023)

Considerations for Optimization of High-Throughput Sequencing Bioinformatics Pipelines for Virus Detection
por: Lambert, Christophe, et al.
Publicado: (2018)

Applications of High-Throughput Sequencing for In Vitro Selection and Characterization of Aptamers
por: Nguyen Quang, Nam, et al.
Publicado: (2016)

Bioinformatics of Cancer ncRNA in High Throughput Sequencing: Present State and Challenges
por: Jorge, Natasha Andressa Nogueira, et al.
Publicado: (2012)

FASTAptamer: A Bioinformatic Toolkit for High-throughput Sequence Analysis of Combinatorial Selections
por: Alam, Khalid K, et al.
Publicado: (2015)

The RNA workbench: best practices for RNA and high-throughput sequencing bioinformatics in Galaxy
por: Grüning, Björn A., et al.
Publicado: (2017)

Prevalence and epidemiological investigation of mgrB-dependent colistin resistance in extensively drug resistant Klebsiella pneumoniae in Iran
por: Zahedi Bialvaei, Abed, et al.
Publicado: (2023)

Circumventing colistin resistance by combining colistin and antimicrobial peptides to kill colistin-resistant and multidrug-resistant Gram-negative bacteria
por: Witherell, Kaitlin S., et al.
Publicado: (2020)

Drug Repurposing to Fight Colistin and Carbapenem-Resistant Bacteria
por: Peyclit, Lucie, et al.
Publicado: (2019)

First report of whole-genome analysis of an extensively drug-resistant Mycobacterium tuberculosis clinical isolate with bedaquiline, linezolid and clofazimine resistance from Uganda
por: Kabahita, Jupiter Marina, et al.
Publicado: (2022)

Transition of colistin dependence into colistin resistance in Acinetobacter baumannii
por: Lee, Ji-Young, et al.
Publicado: (2017)

Recent progress on elucidating the molecular mechanism of plasmid-mediated colistin resistance and drug design
por: Kai, Jindan, et al.
Publicado: (2019)

Synergistic Effects of Capric Acid and Colistin against Colistin-Susceptible and Colistin-Resistant Enterobacterales
por: Liu, Yi-Yun, et al.
Publicado: (2022)

Colistin and its role in the Era of antibiotic resistance: an extended review (2000–2019)
por: El-Sayed Ahmed, Mohamed Abd El-Gawad, et al.
Publicado: (2020)

Molecular mechanisms related to colistin resistance in Enterobacteriaceae
por: Aghapour, Zahra, et al.
Publicado: (2019)

Is There a Role for the Therapeutic Drug Monitoring of Colistin? An Overview
por: Avila, Maria-Paula, et al.
Publicado: (2020)

Identification of miRNA from Porphyra yezoensis by High-Throughput Sequencing and Bioinformatics Analysis
por: Liang, Chengwei, et al.
Publicado: (2010)

Identification of MicroRNAs from Eugenia uniflora by High-Throughput Sequencing and Bioinformatics Analysis
por: Guzman, Frank, et al.
Publicado: (2012)

Identification and Characterization of miRNAs in Chondrus crispus by High-Throughput Sequencing and Bioinformatics Analysis
por: Gao, Fan, et al.
Publicado: (2016)

Galaxy Workflows for Web-based Bioinformatics Analysis of Aptamer High-throughput Sequencing Data
por: Thiel, William H
Publicado: (2016)

Bacteriophage as a Novel Therapeutic Weapon for Killing Colistin-Resistant Multi-Drug-Resistant and Extensively Drug-Resistant Gram-Negative Bacteria
por: Mousavi, Seyed Mohammad, et al.
Publicado: (2021)

Role of efflux pumps, their inhibitors, and regulators in colistin resistance
por: Ding, Yinhuan, et al.
Publicado: (2023)

Is Africa ready for mobile colistin resistance threat?
por: Anyanwu, Madubuike Umunna, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_4uragglrhob7021mnjrd1gg4ht