Cargando…

An optimised eDNA protocol for detecting fish in lentic and lotic freshwaters using a small water volume

Environmental DNA is increasingly being used for assessing the presence and relative abundance of fish in freshwater, but existing protocols typically rely on filtering large volumes of water which is not always practical. We compared the effects of water volume, filtration type and eDNA extraction...

Descripción completa

Detalles Bibliográficos
Autores principales:	Muha, Teja Petra, Robinson, Chloe Victoria, Garcia de Leaniz, Carlos, Consuegra, Sofia
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2019
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6636732/ https://www.ncbi.nlm.nih.gov/pubmed/31314760 http://dx.doi.org/10.1371/journal.pone.0219218

Ejemplares similares

Morphology of lentic and lotic tadpoles from Madagascar
por: Laudor, Jörn, et al.
Publicado: (2021)

A comprehensive review of water quality indices for lotic and lentic ecosystems
por: Mogane, Lazarus Katlego, et al.
Publicado: (2023)

Contrasting seasonal and spatial distribution of native and invasive Codium seaweed revealed by targeting species‐specific eDNA
por: Muha, Teja Petra, et al.
Publicado: (2019)

Introgressive hybridization erodes morphological divergence between lentic and lotic habitats in an endangered minnow
por: Baker, Henry K., et al.
Publicado: (2021)

Environmental DNA captures native and non-native fish community variations across the lentic and lotic systems of a megacity
por: Zhang, Shan, et al.
Publicado: (2022)

Spatial and temporal patterns of environmental DNA detection to inform sampling protocols in lentic and lotic systems
por: Bedwell, Mallory E., et al.
Publicado: (2020)

Comparison of three sampling methods for small-bodied fish in lentic nearshore and open water habitats
por: Merz, Joseph E., et al.
Publicado: (2021)

Five Novel Freshwater Ascomycetes Indicate High Undiscovered Diversity in Lotic Habitats in Thailand
por: Calabon, Mark S., et al.
Publicado: (2021)

Evaluating the effects of laboratory protocols on eDNA detection probability for an endangered freshwater fish
por: Piggott, Maxine P.
Publicado: (2016)

Draft Genome Sequence of the Planktic Cyanobacterium Tychonema bourrellyi, Isolated from Alpine Lentic Freshwater
por: Pinto, Federica, et al.
Publicado: (2017)

Effect of artificial barriers on the distribution of the invasive signal crayfish and Chinese mitten crab
por: Robinson, Chloe Victoria, et al.
Publicado: (2019)

One size does not fit all: inter- and intraspecific variation in the swimming performance of contrasting freshwater fish
por: Jones, Peter E, et al.
Publicado: (2020)

An eDNA Assay to Monitor a Globally Invasive Fish Species from Flowing Freshwater
por: Adrian-Kalchhauser, Irene, et al.
Publicado: (2016)

Improving Species Distribution Modelling of freshwater invasive species for management applications
por: Rodríguez-Rey, Marta, et al.
Publicado: (2019)

Identifying spawning sites and other critical habitat in lotic systems using eDNA “snapshots”: A case study using the sea lamprey Petromyzon marinus L.
por: Bracken, Fiona S. A., et al.
Publicado: (2018)

Data on optimisation of a multiplex HRM-qPCR assay for native and invasive crayfish as well as the crayfish plague in four river catchments
por: Robinson, Chloe Victoria, et al.
Publicado: (2018)

Assessing Environmental DNA Detection in Controlled Lentic Systems
por: Moyer, Gregory R., et al.
Publicado: (2014)

Widespread cryptic viral infections in lotic biofilms
por: Payne, Alexandra T., et al.
Publicado: (2019)

Patterns of natural selection acting on the mitochondrial genome of a locally adapted fish species
por: Consuegra, Sofia, et al.
Publicado: (2015)

MHC class I‐α population differentiation in a commercial fish, the European sea bass (Dicentrarchus labrax)
por: Ratcliffe, Frances C., et al.
Publicado: (2022)

Monitoring of spatiotemporal occupancy patterns of fish and amphibian species in a lentic aquatic system using environmental DNA
por: Brys, Rein, et al.
Publicado: (2020)

Cortisol-Related Signatures of Stress in the Fish Microbiome
por: Uren Webster, Tamsyn M., et al.
Publicado: (2020)

Microcystin Prevalence throughout Lentic Waterbodies in Coastal Southern California
por: Howard, Meredith D. A., et al.
Publicado: (2017)

Development and Validation of Environmental DNA (eDNA) Markers for Detection of Freshwater Turtles
por: Davy, Christina M., et al.
Publicado: (2015)

Winning the invasion roulette: escapes from fish farms increase admixture and facilitate establishment of non-native rainbow trout
por: Consuegra, Sofia, et al.
Publicado: (2011)

Phenotypic plasticity of a generalist fish species resident to lotic environments: Insights from the Great Lakes region
por: Hetzel, Claire, et al.
Publicado: (2023)

Less can be more: loss of MHC functional diversity can reflect adaptation to novel conditions during fish invasions
por: Monzón-Argüello, Catalina, et al.
Publicado: (2013)

Benefits of the microalgae Spirulina and Schizochytrium in fish nutrition: a meta-analysis
por: Trevi, S., et al.
Publicado: (2023)

Colour plasticity in response to social context and parasitic infection in a self-fertilizing fish
por: Pawluk, Rebecca Jane, et al.
Publicado: (2019)

Aquatic beetles influence colonization of disparate taxa in small lentic systems
por: Pintar, Matthew R., et al.
Publicado: (2020)

Toward an ecoregion scale evaluation of eDNA metabarcoding primers: A case study for the freshwater fish biodiversity of the Murray–Darling Basin (Australia)
por: Bylemans, Jonas, et al.
Publicado: (2018)

Genetic diversity and parasite facilitated establishment of the invasive signal crayfish (Pacifastacus leniusculus) in Great Britain
por: Robinson, Chloe Victoria, et al.
Publicado: (2018)

Trace element accumulation in lotic dragonfly nymphs: Genus matters
por: Fletcher, Dean E., et al.
Publicado: (2017)

Density-dependent changes in neophobia and stress-coping styles in the world's oldest farmed fish
por: Champneys, T., et al.
Publicado: (2018)

Carnivory during Ontogeny of the Plagioscion squamosissimus: A Successful Non-Native Fish in a Lentic Environment of the Upper Paraná River Basin
por: Neves, Mayara Pereira, et al.
Publicado: (2015)

Evaluating freshwater macroinvertebrates from eDNA metabarcoding: A river Nalón case study
por: Fernández, Sara, et al.
Publicado: (2018)

A Review and Perspective of eDNA Application to Eutrophication and HAB Control in Freshwater and Marine Ecosystems
por: Liu, Qi, et al.
Publicado: (2020)

Evaluation of the quality of lentic ecosystems in Romania by a GIS based WRASTIC model
por: Niculae, Mihaita-Iulian, et al.
Publicado: (2021)

Data on the concentration of heavy metals and metalloids in lotic water of the Mantaro river watershed and human risk assessment, Peru
por: Custodio, María, et al.
Publicado: (2020)

eDNA metabarcoding of small plankton samples to detect fish larvae and their preys from Atlantic and Pacific waters
por: Garcia-Vazquez, Eva, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_pq3dcs4e5sipdidodugbkpp8il