Cargando…
Amplification-free library preparation with SAFE Hi-C uses ligation products for deep sequencing to improve traditional Hi-C analysis
PCR amplification of Hi-C libraries introduces unusable duplicates and results in a biased representation of chromatin interactions. We present a simplified, fast, and economically efficient Hi-C library preparation procedure, SAFE Hi-C, which generates sufficient non-amplified ligation products for...
Autores principales: | Niu, Longjian, Shen, Wei, Huang, Yingzhang, He, Na, Zhang, Yuedong, Sun, Jialei, Wan, Jing, Jiang, Daxin, Yang, Manyun, Tse, Yu Chung, Li, Li, Hou, Chunhui |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6642088/ https://www.ncbi.nlm.nih.gov/pubmed/31341966 http://dx.doi.org/10.1038/s42003-019-0519-y |
Ejemplares similares
-
The DLO Hi-C Tool for Digestion-Ligation-Only Hi-C Chromosome Conformation Capture Data Analysis
por: Hong, Ping, et al.
Publicado: (2020) -
HiC-spector: a matrix library for spectral and reproducibility analysis of Hi-C contact maps
por: Yan, Koon-Kiu, et al.
Publicado: (2017) -
Global Quantitative Mapping of Enhancers in Rice by STARR-seq
por: Sun, Jialei, et al.
Publicado: (2019) -
Comparison of Hi-C results using in-solution versus in-nucleus ligation
por: Nagano, Takashi, et al.
Publicado: (2015) -
GrapHi-C: graph-based visualization of Hi-C datasets
por: MacKay, Kimberly, et al.
Publicado: (2018)