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Draft genome sequence of Aspergillus flavus isolate TERIBR1, a highly tolerant fungus to chromium stress
OBJECTIVES: Aspergillus flavus isolate TERIBR1 was isolated from tannery sludge highly contaminated with chromium. During characterization process, it exhibited capability to adapt and grow in fungal growth media amended with chromium concentration as high as 250 mg/l. In order to understand the gen...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6642553/ https://www.ncbi.nlm.nih.gov/pubmed/31324264 http://dx.doi.org/10.1186/s13104-019-4484-9 |
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author | Singh, Pushplata Prasad Jaiswar, Akanksha Srivastava, Divya Adholeya, Alok |
author_facet | Singh, Pushplata Prasad Jaiswar, Akanksha Srivastava, Divya Adholeya, Alok |
author_sort | Singh, Pushplata Prasad |
collection | PubMed |
description | OBJECTIVES: Aspergillus flavus isolate TERIBR1 was isolated from tannery sludge highly contaminated with chromium. During characterization process, it exhibited capability to adapt and grow in fungal growth media amended with chromium concentration as high as 250 mg/l. In order to understand the genetic underpinnings of the chromium tolerance trait, whole genome sequencing of the TERIBR1 genome was carried out. Information from the current genome will facilitate an understanding of the mechanisms underlying fungal adaptation to heavy metal stress and also heavy metal bioremediation. DATA DESCRIPTION: Here, we report the draft genome sequence along with the assembly and annotation methods used for genome sequence of the A. flavus isolate TERIBR1. The draft genome assembly size is estimated at 37.7 Mb coding for 13,587 genes and has high similarity to the reference genome of A. flavus strain NRRL3357. |
format | Online Article Text |
id | pubmed-6642553 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-66425532019-07-29 Draft genome sequence of Aspergillus flavus isolate TERIBR1, a highly tolerant fungus to chromium stress Singh, Pushplata Prasad Jaiswar, Akanksha Srivastava, Divya Adholeya, Alok BMC Res Notes Data Note OBJECTIVES: Aspergillus flavus isolate TERIBR1 was isolated from tannery sludge highly contaminated with chromium. During characterization process, it exhibited capability to adapt and grow in fungal growth media amended with chromium concentration as high as 250 mg/l. In order to understand the genetic underpinnings of the chromium tolerance trait, whole genome sequencing of the TERIBR1 genome was carried out. Information from the current genome will facilitate an understanding of the mechanisms underlying fungal adaptation to heavy metal stress and also heavy metal bioremediation. DATA DESCRIPTION: Here, we report the draft genome sequence along with the assembly and annotation methods used for genome sequence of the A. flavus isolate TERIBR1. The draft genome assembly size is estimated at 37.7 Mb coding for 13,587 genes and has high similarity to the reference genome of A. flavus strain NRRL3357. BioMed Central 2019-07-19 /pmc/articles/PMC6642553/ /pubmed/31324264 http://dx.doi.org/10.1186/s13104-019-4484-9 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Data Note Singh, Pushplata Prasad Jaiswar, Akanksha Srivastava, Divya Adholeya, Alok Draft genome sequence of Aspergillus flavus isolate TERIBR1, a highly tolerant fungus to chromium stress |
title | Draft genome sequence of Aspergillus flavus isolate TERIBR1, a highly tolerant fungus to chromium stress |
title_full | Draft genome sequence of Aspergillus flavus isolate TERIBR1, a highly tolerant fungus to chromium stress |
title_fullStr | Draft genome sequence of Aspergillus flavus isolate TERIBR1, a highly tolerant fungus to chromium stress |
title_full_unstemmed | Draft genome sequence of Aspergillus flavus isolate TERIBR1, a highly tolerant fungus to chromium stress |
title_short | Draft genome sequence of Aspergillus flavus isolate TERIBR1, a highly tolerant fungus to chromium stress |
title_sort | draft genome sequence of aspergillus flavus isolate teribr1, a highly tolerant fungus to chromium stress |
topic | Data Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6642553/ https://www.ncbi.nlm.nih.gov/pubmed/31324264 http://dx.doi.org/10.1186/s13104-019-4484-9 |
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