Cargando…

Draft genome sequence of Aspergillus flavus isolate TERIBR1, a highly tolerant fungus to chromium stress

OBJECTIVES: Aspergillus flavus isolate TERIBR1 was isolated from tannery sludge highly contaminated with chromium. During characterization process, it exhibited capability to adapt and grow in fungal growth media amended with chromium concentration as high as 250 mg/l. In order to understand the gen...

Descripción completa

Detalles Bibliográficos
Autores principales: Singh, Pushplata Prasad, Jaiswar, Akanksha, Srivastava, Divya, Adholeya, Alok
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6642553/
https://www.ncbi.nlm.nih.gov/pubmed/31324264
http://dx.doi.org/10.1186/s13104-019-4484-9
_version_ 1783436999034667008
author Singh, Pushplata Prasad
Jaiswar, Akanksha
Srivastava, Divya
Adholeya, Alok
author_facet Singh, Pushplata Prasad
Jaiswar, Akanksha
Srivastava, Divya
Adholeya, Alok
author_sort Singh, Pushplata Prasad
collection PubMed
description OBJECTIVES: Aspergillus flavus isolate TERIBR1 was isolated from tannery sludge highly contaminated with chromium. During characterization process, it exhibited capability to adapt and grow in fungal growth media amended with chromium concentration as high as 250 mg/l. In order to understand the genetic underpinnings of the chromium tolerance trait, whole genome sequencing of the TERIBR1 genome was carried out. Information from the current genome will facilitate an understanding of the mechanisms underlying fungal adaptation to heavy metal stress and also heavy metal bioremediation. DATA DESCRIPTION: Here, we report the draft genome sequence along with the assembly and annotation methods used for genome sequence of the A. flavus isolate TERIBR1. The draft genome assembly size is estimated at 37.7 Mb coding for 13,587 genes and has high similarity to the reference genome of A. flavus strain NRRL3357.
format Online
Article
Text
id pubmed-6642553
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-66425532019-07-29 Draft genome sequence of Aspergillus flavus isolate TERIBR1, a highly tolerant fungus to chromium stress Singh, Pushplata Prasad Jaiswar, Akanksha Srivastava, Divya Adholeya, Alok BMC Res Notes Data Note OBJECTIVES: Aspergillus flavus isolate TERIBR1 was isolated from tannery sludge highly contaminated with chromium. During characterization process, it exhibited capability to adapt and grow in fungal growth media amended with chromium concentration as high as 250 mg/l. In order to understand the genetic underpinnings of the chromium tolerance trait, whole genome sequencing of the TERIBR1 genome was carried out. Information from the current genome will facilitate an understanding of the mechanisms underlying fungal adaptation to heavy metal stress and also heavy metal bioremediation. DATA DESCRIPTION: Here, we report the draft genome sequence along with the assembly and annotation methods used for genome sequence of the A. flavus isolate TERIBR1. The draft genome assembly size is estimated at 37.7 Mb coding for 13,587 genes and has high similarity to the reference genome of A. flavus strain NRRL3357. BioMed Central 2019-07-19 /pmc/articles/PMC6642553/ /pubmed/31324264 http://dx.doi.org/10.1186/s13104-019-4484-9 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Data Note
Singh, Pushplata Prasad
Jaiswar, Akanksha
Srivastava, Divya
Adholeya, Alok
Draft genome sequence of Aspergillus flavus isolate TERIBR1, a highly tolerant fungus to chromium stress
title Draft genome sequence of Aspergillus flavus isolate TERIBR1, a highly tolerant fungus to chromium stress
title_full Draft genome sequence of Aspergillus flavus isolate TERIBR1, a highly tolerant fungus to chromium stress
title_fullStr Draft genome sequence of Aspergillus flavus isolate TERIBR1, a highly tolerant fungus to chromium stress
title_full_unstemmed Draft genome sequence of Aspergillus flavus isolate TERIBR1, a highly tolerant fungus to chromium stress
title_short Draft genome sequence of Aspergillus flavus isolate TERIBR1, a highly tolerant fungus to chromium stress
title_sort draft genome sequence of aspergillus flavus isolate teribr1, a highly tolerant fungus to chromium stress
topic Data Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6642553/
https://www.ncbi.nlm.nih.gov/pubmed/31324264
http://dx.doi.org/10.1186/s13104-019-4484-9
work_keys_str_mv AT singhpushplataprasad draftgenomesequenceofaspergillusflavusisolateteribr1ahighlytolerantfungustochromiumstress
AT jaiswarakanksha draftgenomesequenceofaspergillusflavusisolateteribr1ahighlytolerantfungustochromiumstress
AT srivastavadivya draftgenomesequenceofaspergillusflavusisolateteribr1ahighlytolerantfungustochromiumstress
AT adholeyaalok draftgenomesequenceofaspergillusflavusisolateteribr1ahighlytolerantfungustochromiumstress